RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RAMP1O60894 148 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 IGHV3-48P01763 117 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 PPBPP02775 128 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 IGKV1D-43A0A0B4J1Z2 117 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 RFPL3SP0C7P2 107 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 NDUFAF3Q9BU61 184 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 FGF16O43320 207 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 RBMY1BA6NDE4 496 aaKnown RBP16.91■□□□□ 0.3
RNF40-203ENST00000493683 RBMY1EA6NEQ0 496 aaKnown RBP16.91■□□□□ 0.3
RNF40-203ENST00000493683 RBMY1DP0C7P1 496 aaKnown RBP16.91■□□□□ 0.3
RNF40-203ENST00000493683 RBMY1A1P0DJD3 496 aaKnown RBP16.91■□□□□ 0.3
RNF40-203ENST00000493683 RBMY1CP0DJD4 496 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 RNF126Q9BV68 326 aa16.91■□□□□ 0.3
RNF40-203ENST00000493683 TDRD15B5MCY1 1934 aaKnown RBP16.9■□□□□ 0.3
RNF40-203ENST00000493683 TIAF1O95411 115 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.9■□□□□ 0.3
RNF40-203ENST00000493683 LINC01559Q495D7 138 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 NRN1Q9NPD7 142 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 LAMTOR2Q9Y2Q5 125 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 SVILO95425 2214 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 C15orf61A6NNL5 157 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 HIGD1CA8MV81 97 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 IGKV1D-33P01593 117 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 IGKV1-33P01594 117 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 OR10J3Q5JRS4 329 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 LOC105371267A0A1B0GV96 52 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 FABP5P3A8MUU1 101 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 PROB1E7EW31 1015 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 TYMSP04818 313 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 BTCP35070 178 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 SRSF7Q16629 238 aaKnown RBP eCLIP16.9■□□□□ 0.3
RNF40-203ENST00000493683 FAM89BQ8N5H3 189 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 MRPL20Q9BYC9 149 aaKnown RBP16.9■□□□□ 0.3
RNF40-203ENST00000493683 THSD7AQ9UPZ6 1657 aa16.9■□□□□ 0.3
RNF40-203ENST00000493683 CSRP2Q16527 193 aa16.89■□□□□ 0.3
RNF40-203ENST00000493683 CLDN16Q9Y5I7 305 aa16.89■□□□□ 0.3
RNF40-203ENST00000493683 BEND2Q8NDZ0 799 aa16.89■□□□□ 0.29
RNF40-203ENST00000493683 PSG7Q13046 419 aa16.89■□□□□ 0.29
RNF40-203ENST00000493683 ZNF362Q5T0B9 420 aaPredicted RBP16.89■□□□□ 0.29
RNF40-203ENST00000493683 ZIC4Q8N9L1 334 aa16.89■□□□□ 0.29
RNF40-203ENST00000493683 CACNG7P62955 275 aa16.89■□□□□ 0.29
RNF40-203ENST00000493683 TMEM242Q9NWH2 141 aa16.89■□□□□ 0.29
RNF40-203ENST00000493683 AHCTF1Q8WYP5 2266 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 IGLV3-32A0A0A0MS00 114 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 TMEM262E9PQX1 116 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 UBR3Q6ZT12 1888 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 TMEM50AO95807 157 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
RNF40-203ENST00000493683 NXT2Q9NPJ8 142 aaKnown RBP16.88■□□□□ 0.29
RNF40-203ENST00000493683 CNTFRP26992 372 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 FAM216BQ8N7L0 139 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 SERF1AO75920 110 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 GNB1LQ9BYB4 327 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 PSMB11A5LHX3 300 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 DMRTA1Q5VZB9 504 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 FDCSPQ8NFU4 85 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 FAM57AQ8TBR7 257 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 IMMP1LQ96LU5 166 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 SIGLEC12Q96PQ1 595 aa16.88■□□□□ 0.29
RNF40-203ENST00000493683 TUBGCP6Q96RT7 1819 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 IGLV3-12A0A075B6K2 115 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 PF4P02776 101 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 MYOD1P15172 320 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 ANKRD31Q8N7Z5 1873 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 LEPP41159 167 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 SLC25A2Q9BXI2 301 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 TRAV9-2A0A087WT02 112 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 ID3Q02535 119 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 PLAURQ03405 335 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 SLC25A28Q96A46 364 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 CHCHD1Q96BP2 118 aaKnown RBP16.87■□□□□ 0.29
RNF40-203ENST00000493683 DUX3Q96PT4 197 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 YAE1D1Q9NRH1 226 aa16.87■□□□□ 0.29
RNF40-203ENST00000493683 IGKV3OR2-268A0A0C4DH90 116 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 PGPEP1LA6NFU8 196 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 HBDP02042 147 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 ZNF497Q6ZNH5 498 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 ATP5L2Q7Z4Y8 100 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 NR2C2APQ86WQ0 139 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 MBD3L1Q8WWY6 194 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 COL5A3P25940 1745 aaPredicted RBP16.86■□□□□ 0.29
RNF40-203ENST00000493683 CCDC88CQ9P219 2028 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 RGPD3A6NKT7 1758 aaPredicted RBP16.86■□□□□ 0.29
RNF40-203ENST00000493683 SAA1P0DJI8 122 aaPredicted RBP16.86■□□□□ 0.29
RNF40-203ENST00000493683 C17orf100A8MU93 164 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 FAM166AQ6J272 317 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 OR5A1Q8NGJ0 315 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 NBR2O15453 112 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 LY6G6FQ5SQ64 297 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 WBP1Q96G27 269 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 DOCK5Q9H7D0 1870 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 PEMTQ9UBM1 199 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 EPDR1Q9UM22 224 aa16.86■□□□□ 0.29
RNF40-203ENST00000493683 IGHV3-35A0A0C4DH35 117 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 TCRBV4S1A1TA0A5B7 111 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 NUDT10Q8NFP7 164 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 PLPPR1Q8TBJ4 325 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 TGFBR3LH3BV60 316 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 IGHV1-2P23083 117 aa16.85■□□□□ 0.29
RNF40-203ENST00000493683 SRSF1Q07955 248 aaKnown RBP eCLIP16.85■□□□□ 0.299e-10■□□□□ 8.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms