RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TCRBV4S1A1TA0A5B7 111 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 NPIPB5A8MRT5 1133 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 MED6O75586 246 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 OR2J3O76001 311 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 RPLP1P05386 114 aaKnown RBP12.31□□□□□ -0.44
HPS4-216ENST00000493455 RRAS2P62070 204 aaPredicted RBP12.31□□□□□ -0.44
HPS4-216ENST00000493455 LRRC37A5PQ49AS3 106 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 HSD17B13Q7Z5P4 300 aaPredicted RBP12.31□□□□□ -0.44
HPS4-216ENST00000493455 OR2C3Q8N628 320 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 WDR89Q96FK6 387 aaPredicted RBP12.31□□□□□ -0.44
HPS4-216ENST00000493455 KLK15Q9H2R5 256 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 ZNF580Q9UK33 172 aa12.31□□□□□ -0.44
HPS4-216ENST00000493455 RCL1Q9Y2P8 373 aaKnown RBP12.31□□□□□ -0.44
HPS4-216ENST00000493455 FBN1P35555 2871 aaKnown RBP12.31□□□□□ -0.44
HPS4-216ENST00000493455 IGHV3-21A0A0B4J1V1 117 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 FAM90A26D6RGX4 464 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 SYNGR2O43760 224 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 IFNA10P01566 189 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 IGHG4P01861 327 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 MBPP02686 304 aaPredicted RBP12.3□□□□□ -0.44
HPS4-216ENST00000493455 CTRB1P17538 263 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 CXCL3P19876 107 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 H2BFSP57053 126 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 FOXE3Q13461 319 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 AARDQ4LEZ3 155 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 CTRB2Q6GPI1 263 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 Q6ZNX1 250 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 OR11H7Q8NGC8 314 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 MISP3Q96FF7 219 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 OR5B12Q96R08 314 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 P2RX4Q99571 388 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 SRSF8Q9BRL6 282 aaKnown RBP12.3□□□□□ -0.44
HPS4-216ENST00000493455 CACFD1Q9UGQ2 172 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 S4R3C0 116 aa12.3□□□□□ -0.44
HPS4-216ENST00000493455 NUDT19A8MXV4 375 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 H3BP45 60 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 IGLV1-40P01703 118 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 IGHV3-11P01762 117 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 ELANEP08246 267 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 RAB9AP51151 201 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 RAB32Q13637 225 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 NSUN5P1Q3KNT7 163 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 TCTEX1D4Q5JR98 221 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 COMMD1Q8N668 190 aa12.29□□□□□ -0.44
HPS4-216ENST00000493455 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
HPS4-216ENST00000493455 CITED2Q99967 270 aaPredicted RBP12.29□□□□□ -0.44
HPS4-216ENST00000493455 F11RQ9Y624 299 aaKnown RBP12.29□□□□□ -0.44
HPS4-216ENST00000493455 K7EPK0 472 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 L7N2F9 121 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 IGHV3-23P01764 117 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 CRYGCP07315 174 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 PSMB8P28062 276 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 SUB1P53999 127 aaKnown RBP eCLIP12.28□□□□□ -0.44
HPS4-216ENST00000493455 VAMP2P63027 116 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 RHOGP84095 191 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 ID3Q02535 119 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 PDLIM3Q53GG5 364 aaPredicted RBP12.28□□□□□ -0.44
HPS4-216ENST00000493455 SLC24A4Q8NFF2 622 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 WIPF2Q8TF74 440 aaPredicted RBP12.28□□□□□ -0.44
HPS4-216ENST00000493455 SLA2Q9H6Q3 261 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 PSENENQ9NZ42 101 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 FBXL7Q9UJT9 491 aa12.28□□□□□ -0.44
HPS4-216ENST00000493455 H3BUA1 57 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 CYB5BO43169 146 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 NDUFB8O95169 186 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 RNASE2P10153 161 aaKnown RBP12.27□□□□□ -0.45
HPS4-216ENST00000493455 NPY1RP25929 384 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 BCAP31P51572 246 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 MFAP2P55001 183 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 SPANXN5Q5MJ07 72 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 C18orf65Q6ZTR6 163 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 CIB3Q96Q77 187 aaPredicted RBP12.27□□□□□ -0.45
HPS4-216ENST00000493455 NMES1Q9C002 83 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 ZNF436Q9C0F3 470 aaPredicted RBP12.27□□□□□ -0.45
HPS4-216ENST00000493455 DMRT1Q9Y5R6 373 aa12.27□□□□□ -0.45
HPS4-216ENST00000493455 IGLV11-55A0A075B6I3 123 aa12.26□□□□□ -0.45
HPS4-216ENST00000493455 HIST1H1BP16401 226 aaKnown RBP12.26□□□□□ -0.45
HPS4-216ENST00000493455 HTR2BP41595 481 aa12.26□□□□□ -0.45
HPS4-216ENST00000493455 CYCSP99999 105 aaKnown RBP12.26□□□□□ -0.45
HPS4-216ENST00000493455 ATP5G2Q06055 141 aa12.26□□□□□ -0.45
HPS4-216ENST00000493455 KLHL30-AS1Q8NEE0 82 aa12.26□□□□□ -0.45
HPS4-216ENST00000493455 OR1P1Q8NH06 330 aa12.26□□□□□ -0.45
HPS4-216ENST00000493455 FANCD2OSQ96PS1 177 aa12.26□□□□□ -0.45
HPS4-216ENST00000493455 A0A1B0GVG6 124 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 ANKRD34BA5PLL1 514 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 IGHV3-48P01763 117 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 IFNA4P05014 189 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 OR8U8P0C7N1 319 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 PVALBP20472 110 aaPredicted RBP12.25□□□□□ -0.45
HPS4-216ENST00000493455 RPL23AP62750 156 aaKnown RBP12.25□□□□□ -0.45
HPS4-216ENST00000493455 CD83Q01151 205 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 EXOSC2Q13868 293 aaKnown RBP12.25□□□□□ -0.45
HPS4-216ENST00000493455 C15orf32Q32M92 178 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 ZNF491Q8N8L2 437 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 ZNF114Q8NC26 417 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 OR1L6Q8NGR2 347 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 PPP1R1CQ8WVI7 109 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 OR4C12Q96R67 309 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 ZNF747Q9BV97 191 aa12.25□□□□□ -0.45
HPS4-216ENST00000493455 GNB4Q9HAV0 340 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms