RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ERP29P30040 261 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ACTBP60709 375 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 LSM3P62310 102 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 RPL30P62888 115 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 SLC35A2P78381 396 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 HLA-DRB3P79483 266 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MEF2CQ06413 473 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MRPL28Q13084 256 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 GPR50Q13585 617 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MMDQ15546 238 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 HMGN3Q15651 99 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 SNCBQ16143 134 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ANKRD55Q3KP44 614 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MORN2Q502X0 79 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MINOS1Q5TGZ0 78 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MEDAGQ5VYS4 303 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ELP2Q6IA86 826 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 C22orf42Q6IC83 251 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ZFP1Q6P2D0 407 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 RPL22L1Q6P5R6 122 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ASCL4Q6XD76 172 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ADAMTSL5Q6ZMM2 481 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 SLC25A48Q6ZT89 311 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 NDUFA11Q86Y39 141 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 TGIF2LXQ8IUE1 241 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 C10orf67Q8IYJ2 551 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 C8orf59Q8N0T1 100 aaPredicted RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 FAM71E2Q8N5Q1 922 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 PXT1Q8NFP0 134 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 OR5T1Q8NG75 326 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 OR5D14Q8NGL3 314 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 OR6M1Q8NGM8 313 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 LGALS14Q8TCE9 139 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 DCUN1D4Q92564 292 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MALSU1Q96EH3 234 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 KCTD7Q96MP8 289 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 P2RX4Q99571 388 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM59Q9BXS4 323 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 PECRQ9BY49 303 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 METTL9Q9H1A3 318 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 OR51E2Q9H255 320 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 GAL3ST2Q9H3Q3 398 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ISYNA1Q9NPH2 558 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM138Q9NPI0 162 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 OR2S2Q9NQN1 319 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 BABAM2Q9NXR7 383 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 TRAPPC2LQ9UL33 140 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 EXOSC1Q9Y3B2 195 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 RPL36Q9Y3U8 105 aaKnown RBP2.1□□□□□ -2.07
PTCD3-218ENST00000493430 MINOS1-NBL1R4GNA1 71 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 STARD9Q9P2P6 4700 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
PTCD3-218ENST00000493430 ALMS1Q8TCU4 4167 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 KMT2CQ8NEZ4 4911 aaKnown RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TRAV3A0A0B4J244 114 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 IGHV3-35A0A0C4DH35 117 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 A0A1B0GUS0 222 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM235A6NFC5 223 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 EFCAB10A6NFE3 127 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TMEM14DPA8MWL7 114 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 SEC14L6B5MCN3 397 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 MCRIP1C9JLW8 97 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 PPP5D1E7EU14 171 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 H0YJW9 148 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 H7C2Y5 167 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 M0R1X1 148 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 MFNGO00587 321 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CCSO14618 274 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 BET1O15155 118 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 PDCD6O75340 191 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 IGLV2-23P01705 113 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 IGHG2P01859 326 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 RBP4P02753 201 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CD2P06729 351 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CT45A6P0DMU7 189 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CT45A5P0DMU8 189 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CT45A7P0DMV0 189 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 GTF2F2P13984 249 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 NFYAP23511 347 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 CRHBPP24387 322 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 GADD45AP24522 165 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 DCKP27707 260 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 PSMB9P28065 219 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 HSPA13P48723 471 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 DYNLT3P51808 116 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TPPP2P59282 170 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 RPS27AP62979 156 aaKnown RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 EWSR1Q01844 656 aaKnown RBP eCLIP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF45Q02386 682 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF816Q0VGE8 651 aaPredicted RBP2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TMED1Q13445 227 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 MEF2DQ14814 521 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 NEDD8Q15843 81 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TATDN3Q17R31 274 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 HSD17B12Q53GQ0 312 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 YIF1BQ5BJH7 314 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 SPINK9Q5DT21 86 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 UNQ9370/PRO34162Q6UXP9 181 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 TMPRSS11AQ6ZMR5 421 aa2.09□□□□□ -2.07
PTCD3-218ENST00000493430 ZNF600Q6ZNG1 722 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms