RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 MAP1LC3AQ9H492 121 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 EFCAB1Q9HAE3 211 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 PAQR5Q9NXK6 330 aaPredicted RBP0.13□□□□□ -2.39
SYCP1-208ENST00000493377 C3orf18Q9UK00 162 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 MED12Q93074 2177 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 FRAS1Q86XX4 4008 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 PEAK1Q9H792 1746 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 TOPBP1Q92547 1522 aa0.13□□□□□ -2.39
SYCP1-208ENST00000493377 CASP8AP2Q9UKL3 1982 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 MAP3K5Q99683 1374 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 TRBV6-7A0A0A0MS04 114 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 A0A1B0GV50 99 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 PFDN6O15212 129 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 INE1O15225 51 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 COCHO43405 550 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 OR5F1O95221 314 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 TYMSP04818 313 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 CTSDP07339 412 aaPredicted RBP0.12□□□□□ -2.39
SYCP1-208ENST00000493377 HTR1AP08908 422 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 MIFP14174 115 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 RPS4Y1P22090 263 aaKnown RBP0.12□□□□□ -2.39
SYCP1-208ENST00000493377 NAA20P61599 178 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 IFITM2Q01629 132 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 MLLT11Q13015 90 aaPredicted RBP0.12□□□□□ -2.39
SYCP1-208ENST00000493377 TMED1Q13445 227 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 KISS1Q15726 138 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 LCN15Q6UWW0 184 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 LRRN1Q6UXK5 716 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 Q6ZQT0 140 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 SLC51BQ86UW2 128 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 PIGXQ8TBF5 258 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 ATP6V1G3Q96LB4 118 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 OBSCN-AS1Q96MR7 158 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 HDHD2Q9H0R4 259 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 C15orf41Q9Y2V0 281 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 MYO18AQ92614 2054 aaKnown RBP0.12□□□□□ -2.39
SYCP1-208ENST00000493377 ZNF106Q9H2Y7 1883 aaKnown RBP0.12□□□□□ -2.39
SYCP1-208ENST00000493377 TTC21AQ8NDW8 1320 aa0.12□□□□□ -2.39
SYCP1-208ENST00000493377 DOCK3Q8IZD9 2030 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 PLXND1Q9Y4D7 1925 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 PIK3R4Q99570 1358 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 C2orf70A6NJV1 201 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 CXCR6O00574 342 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 OR2T1O43869 369 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 HYPMO75409 117 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 OR5G3P0C626 314 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 COX5BP10606 129 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 COX6A1P12074 109 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 UCHL3P15374 230 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 BRS3P32247 399 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 MAP2K4P45985 399 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 GUK1Q16774 197 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 CLVS2Q5SYC1 327 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 C1orf195Q5TG92 126 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 SFXN4Q6P4A7 337 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 RPL22L1Q6P5R6 122 aaKnown RBP0.11□□□□□ -2.39
SYCP1-208ENST00000493377 AAED1Q7RTV5 226 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 COMMD7Q86VX2 200 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 PHF13Q86YI8 300 aaPredicted RBP0.11□□□□□ -2.39
SYCP1-208ENST00000493377 SBSPONQ8IVN8 264 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 FAM9CQ8IZT9 166 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 LRRC25Q8N386 305 aaPredicted RBP0.11□□□□□ -2.39
SYCP1-208ENST00000493377 Q8N6K4 173 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 OR13C4Q8NGS5 318 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 TMEM106AQ96A25 262 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 DIRAS2Q96HU8 199 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 CNBD2Q96M20 576 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 DERL1Q9BUN8 251 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 CISHQ9NSE2 258 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 CKLFQ9UBR5 152 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 ZFP30Q9Y2G7 519 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 ASCC3Q8N3C0 2202 aaKnown RBP0.11□□□□□ -2.39
SYCP1-208ENST00000493377 RIC1Q4ADV7 1423 aa0.11□□□□□ -2.39
SYCP1-208ENST00000493377 PLXNA4Q9HCM2 1894 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 CHD3Q12873 2000 aaKnown RBP0.1□□□□□ -2.39
SYCP1-208ENST00000493377 TRBV20OR9-2A0A075B6H5 130 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 IGKV1D-42A0A075B6H8 117 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 A0A0A6YYH2 397 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 A0A0D9SG52 128 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 A0A0J9YY10 115 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 A0A1B0GX78 115 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 A6NJ64 397 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 INMT-MINDY4F8WBC2 141 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 ACOX3O15254 700 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 FADS1O60427 444 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 OR1I1O60431 355 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 IGKV1-5P01602 117 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 APOEP02649 317 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 BAALC-AS2P0C853 105 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 SKP1P63208 163 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 SRSF6Q13247 344 aaKnown RBP0.1□□□□□ -2.39
SYCP1-208ENST00000493377 RSU1Q15404 277 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 SPANXN5Q5MJ07 72 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 SPANXN3Q5MJ09 141 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 GDF5OSQ5U4N7 250 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 AADACL3Q5VUY0 350 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 ALKAL1Q6UXT8 129 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 Q6ZS49 121 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 LINC00311Q8N616 119 aa0.1□□□□□ -2.39
SYCP1-208ENST00000493377 Q8N814 137 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms