RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 Q8N2B8 174 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 PPP1R1CQ8WVI7 109 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 NOL4LQ96MY1 436 aaPredicted RBP10.54□□□□□ -0.72
MSH6-208ENST00000493177 PLXNB1O43157 2135 aa10.54□□□□□ -0.72
MSH6-208ENST00000493177 TNCP24821 2201 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 G3V318 75 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 CD28P10747 220 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 AREGP15514 252 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 PVALBP20472 110 aaPredicted RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 PSMB6P28072 239 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 DEFA6Q01524 100 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 IL15RAQ13261 267 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 PDLIM3Q53GG5 364 aaPredicted RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 KHDC1LQ5JSQ8 128 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 C11orf87Q6NUJ2 197 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 HSD17B13Q7Z5P4 300 aaPredicted RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 STPG2Q8N412 459 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 OR5T1Q8NG75 326 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 CIB3Q96Q77 187 aaPredicted RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 SRSF8Q9BRL6 282 aaKnown RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 RANGRFQ9HD47 186 aaPredicted RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
MSH6-208ENST00000493177 PAIP2BQ9ULR5 123 aaKnown RBP10.53□□□□□ -0.72
MSH6-208ENST00000493177 IGLC7A0M8Q6 106 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 IGF1P05019 195 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 PET100P0DJ07 73 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 DEFA4P12838 97 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 SNCAP37840 140 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 WT1-ASQ06250 92 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 FGL1Q08830 312 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 OR2T35Q8NGX2 323 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 TMEM68Q96MH6 324 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 PSENENQ9NZ42 101 aa10.52□□□□□ -0.73
MSH6-208ENST00000493177 A0A1W2PRX2 142 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 H3BP45 60 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 SMLR1H3BR10 107 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 MPC2O95563 127 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 IFNA10P01566 189 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 SUB1P53999 127 aaKnown RBP eCLIP10.51□□□□□ -0.73
MSH6-208ENST00000493177 RPL23AP62750 156 aaKnown RBP10.51□□□□□ -0.73
MSH6-208ENST00000493177 SLC35B1P78383 322 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 AKIRIN2Q53H80 203 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 ASPHD1Q5U4P2 390 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 NDUFA11Q86Y39 141 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 OR2C3Q8N628 320 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 OR4F17Q8NGA8 305 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 OR5AU1Q8NGC0 362 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 OR4X2Q8NGF9 303 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 THAP6Q8TBB0 222 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 OR4F4Q96R69 305 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 RAB40CQ96S21 281 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 CITED2Q99967 270 aaPredicted RBP10.51□□□□□ -0.73
MSH6-208ENST00000493177 GON7Q9BXV9 100 aa10.51□□□□□ -0.73
MSH6-208ENST00000493177 NPIPB5A8MRT5 1133 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 E5RGE8 158 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 DEDDO75618 318 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 LY86O95711 162 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 PF4V1P10720 104 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 CTRB1P17538 263 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 HTR2BP41595 481 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 CAV2P51636 162 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
MSH6-208ENST00000493177 RPP30P78346 268 aaKnown RBP10.5□□□□□ -0.73
MSH6-208ENST00000493177 SPANXN5Q5MJ07 72 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 CTRB2Q6GPI1 263 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 PRSS54Q6PEW0 395 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 C19orf35Q6ZS72 473 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 ZNF329Q86UD4 541 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 C1QL4Q86Z23 238 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 TTC9CQ8N5M4 171 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 SLC24A4Q8NFF2 622 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 DCUN1D4Q92564 292 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 SMIM8Q96KF7 97 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 WNT10AQ9GZT5 417 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 OR5AC2Q9NZP5 309 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 MBD2Q9UBB5 411 aa10.5□□□□□ -0.73
MSH6-208ENST00000493177 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 TCRBV4S1A1TA0A5B7 111 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 PSMB11A5LHX3 300 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 INS-IGF2F8WCM5 200 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 H0YIZ8 118 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 CYB5BO43169 146 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 WIPF1O43516 503 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 PFDN1O60925 122 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 PRH1P02810 166 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 OR8U8P0C7N1 319 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 NPY1RP25929 384 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 RAB11AP62491 216 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 SLC25A24Q6NUK1 477 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 ST6GAL2Q96JF0 529 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 MS4A10Q96PG2 267 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 P2RX4Q99571 388 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 ZNF580Q9UK33 172 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 STRAPQ9Y3F4 350 aaKnown RBP10.49□□□□□ -0.73
MSH6-208ENST00000493177 F11RQ9Y624 299 aaKnown RBP10.49□□□□□ -0.73
MSH6-208ENST00000493177 U3KQ87 197 aa10.49□□□□□ -0.73
MSH6-208ENST00000493177 FXYD6-FXYD2A0A087WZ82 144 aa10.48□□□□□ -0.73
MSH6-208ENST00000493177 TMEM50AO95807 157 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms