RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C1QL4Q86Z23 238 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 RCC1LQ96I51 464 aaKnown RBP10.79□□□□□ -0.68
CCM2-217ENST00000492883 MCRIP2Q9BUT9 160 aaKnown RBP10.79□□□□□ -0.68
CCM2-217ENST00000492883 CACNG5Q9UF02 275 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 SHPKQ9UHJ6 478 aa10.79□□□□□ -0.68
CCM2-217ENST00000492883 IGLV11-55A0A075B6I3 123 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 G3V4G9 280 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 UPK1BO75841 260 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 DUS4LO95620 317 aaKnown RBP10.78□□□□□ -0.68
CCM2-217ENST00000492883 ANXA7P20073 488 aaKnown RBP10.78□□□□□ -0.68
CCM2-217ENST00000492883 SLURP1P55000 103 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 C4orf46Q504U0 113 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 OR2C3Q8N628 320 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 OR1L6Q8NGR2 347 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 ENY2Q9NPA8 101 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 F11RQ9Y624 299 aaKnown RBP10.78□□□□□ -0.68
CCM2-217ENST00000492883 S4R3C0 116 aa10.78□□□□□ -0.68
CCM2-217ENST00000492883 FAM240BA0A1B0GVZ2 78 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 C9orf170A2RU37 121 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 IGHV3-23P01764 117 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 HLA-AP01891 365 aaKnown RBP10.77□□□□□ -0.69
CCM2-217ENST00000492883 TCRBP04435 133 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 OR4E1P0C645 316 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 SULT1A3P0DMM9 295 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 SULT1A4P0DMN0 295 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 ZP3P21754 424 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 SNCAP37840 140 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 HOXA1P49639 335 aaPredicted RBP10.77□□□□□ -0.69
CCM2-217ENST00000492883 SPCS3P61009 180 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 KLK9Q2XQG4 91 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 ANKRD55Q3KP44 614 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 SAMD5Q5TGI4 173 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 DCUN1D4Q92564 292 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 DLX4Q92988 240 aaPredicted RBP10.77□□□□□ -0.69
CCM2-217ENST00000492883 EEF1AKMT3Q96AZ1 226 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 CXorf58Q96LI9 332 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 C20orf85Q9H1P6 137 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 KLK9Q9UKQ9 250 aa10.77□□□□□ -0.69
CCM2-217ENST00000492883 TRAV6A0A075B6T7 132 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.76□□□□□ -0.69
CCM2-217ENST00000492883 DUXBA0A1W2PPF3 345 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 OVOL1O14753 267 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 TRBV12-3P01733 135 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 HOXD3P31249 432 aaPredicted RBP10.76□□□□□ -0.69
CCM2-217ENST00000492883 ASAH1Q13510 395 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 SMCO1Q147U7 214 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 NMSQ5H8A3 153 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 FAM209BQ5JX69 171 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 LRTM2Q8N967 370 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 OR52E5Q8NH55 327 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 COQ8AQ8NI60 647 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 GPR61Q9BZJ8 451 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 CACFD1Q9UGQ2 172 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 TBC1D24Q9ULP9 559 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 DMRT1Q9Y5R6 373 aa10.76□□□□□ -0.69
CCM2-217ENST00000492883 PLXNB1O43157 2135 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 TRBV7-1A0A0A6YYK4 115 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 A0A1B0GU03 582 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 CEBPZOSA8MTT3 80 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 SEC14L6B5MCN3 397 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 NXPH3O95157 252 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 HOXB5P09067 269 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 SUB1P53999 127 aaKnown RBP eCLIP10.75□□□□□ -0.69
CCM2-217ENST00000492883 MFAP2P55001 183 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 DHRS2Q13268 280 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 TATDN3Q17R31 274 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 RPEL1Q2QD12 228 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 CLEC19AQ6UXS0 136 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 LYG2Q86SG7 212 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 OR1P1Q8NH06 330 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 MISP3Q96FF7 219 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 NUDT15Q9NV35 164 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 TMED3Q9Y3Q3 217 aa10.75□□□□□ -0.69
CCM2-217ENST00000492883 IGHV3-21A0A0B4J1V1 117 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 MFSD2BA6NFX1 497 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 INS-IGF2F8WCM5 200 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 CLEC3BP05452 202 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 IFITM3Q01628 133 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 AARDQ4LEZ3 155 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 C9orf66Q5T8R8 295 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 ZNF114Q8NC26 417 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 OR1S1Q8NH92 325 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 ENKURQ8TC29 256 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
CCM2-217ENST00000492883 HEYLQ9NQ87 328 aaPredicted RBP10.74□□□□□ -0.69
CCM2-217ENST00000492883 PPP5D1E7EU14 171 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 GGCTO75223 188 aaKnown RBP10.73□□□□□ -0.69
CCM2-217ENST00000492883 H2AFB2P0C5Z0 115 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 ARL3P36405 182 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 SYNJ2BPP57105 145 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 DEFA1P59665 94 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 DEFA3P59666 94 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 KLF5Q13887 457 aaPredicted RBP10.73□□□□□ -0.69
CCM2-217ENST00000492883 BEAN1Q3B7T3 259 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
CCM2-217ENST00000492883 PINX1Q96BK5 328 aaKnown RBP10.73□□□□□ -0.69
CCM2-217ENST00000492883 CCDC140Q96MF4 163 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
CCM2-217ENST00000492883 BMPR1BO00238 502 aa10.72□□□□□ -0.69
CCM2-217ENST00000492883 OR2C1O95371 312 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms