RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CHCHD2Q9Y6H1 151 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 BIVM-ERCC5R4GMW8 1640 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 HELZP42694 1942 aaKnown RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 CC2D2AQ9P2K1 1620 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 CDK12Q9NYV4 1490 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-220ENST00000492859 DSPPQ9NZW4 1301 aa3.3□□□□□ -1.88
BRCA1-220ENST00000492859 IGHV1OR21-1A0A087WYE8 117 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 TRBV7-6A0A0J9YX20 115 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 PGPA6NDG6 321 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 DIRC3C9JPN6 131 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 UQCRQO14949 82 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 CYB5AP00167 134 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 IGLC2P0DOY2 106 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 IGLC3P0DOY3 106 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 SLC25A6P12236 298 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 CRISP2P16562 243 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 GNLYP22749 145 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 CCL23P55773 120 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 LMO4P61968 165 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 RPS23P62266 143 aaKnown RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 PRR3P79522 188 aaKnown RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF90Q03938 601 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 MSMO1Q15800 293 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ABCA11PQ4W5N1 156 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 FAM182AQ5T1J6 154 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 AADACL3Q5VUY0 350 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 CGB2Q6NT52 195 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 FOXL2NBQ6ZUU3 175 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 KTN1-AS1Q86SY8 53 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF491Q8N8L2 437 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZIC4Q8N9L1 334 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 NEXN-AS1Q8NBZ9 246 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZNRF1Q8ND25 227 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OR4X2Q8NGF9 303 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OR2T10Q8NGZ9 312 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 RPS4Y2Q8TD47 263 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 IGFBPL1Q8WX77 278 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 LINC00526Q96FQ7 95 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 C18orf15Q96N68 181 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 PLA2G2FQ9BZM2 168 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 COMMD5Q9GZQ3 224 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 DEFB127Q9H1M4 99 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 C16orf95Q9H693 158 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 TET3O43151 1660 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 PLXNC1O60486 1568 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 SETBP1Q9Y6X0 1596 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 URB2Q14146 1524 aaKnown RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ATRNO75882 1429 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 TRBV20-1A0A075B6N2 111 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 TRAV8-3A0A0A6YYJ7 113 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 IGHV3OR16-9A0A0B4J2B5 98 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 UNC119BA6NIH7 251 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF705FA8MVS1 300 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OOSP1A8MZH6 123 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 KLLNB2CW77 178 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ANGPTL7O43827 346 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 YPEL1O60688 119 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 JTBO76095 146 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 DUSP14O95147 198 aaKnown RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 TRGC1P0CF51 173 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF705DP0CH99 300 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ZNF705BP0CI00 300 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 SDC2P34741 201 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OPRM1P35372 400 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ERCC8Q13216 396 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 C22orf39Q6P5X5 142 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 MORN3Q6PF18 240 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 SLC25A34Q6PIV7 304 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 NR2C2APQ86WQ0 139 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ODF3L1Q8IXM7 274 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OR10G8Q8NGN5 311 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OR10AC1Q8NH08 325 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 ATP6V0E2Q8NHE4 81 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 DCANP1Q8TF63 244 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 C2orf15Q8WU43 125 aaKnown RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 NEUROG1Q92886 237 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 POP5Q969H6 163 aaKnown RBP3.29□□□□□ -1.88
BRCA1-220ENST00000492859 PGLYRP4Q96LB8 373 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 YPEL2Q96QA6 119 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 IMUPQ9GZP8 106 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 RPS10P5Q9NQ39 176 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 OCIAD1Q9NX40 245 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 RARRES3Q9UL19 164 aa3.29□□□□□ -1.88
BRCA1-220ENST00000492859 PIK3C2BO00750 1634 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 RNF17Q9BXT8 1623 aaKnown RBP3.28□□□□□ -1.88
BRCA1-220ENST00000492859 HCFC1P51610 2035 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 LRRK1Q38SD2 2015 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 RGS12O14924 1447 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 PLIN4Q96Q06 1357 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 RGPD4Q7Z3J3 1758 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 MON2Q7Z3U7 1717 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 TRAV8-1A0A0A6YYK1 113 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 CCL15-CCL14A0A0B4J2E2 113 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 A0A0G2JRQ6 117 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 C7orf66A4D0T2 115 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 C7orf77A4D0Y5 90 aa3.28□□□□□ -1.88
BRCA1-220ENST00000492859 TMEM235A6NFC5 223 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms