RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 FYTTD1Q96QD9 318 aaKnown RBP3.82□□□□□ -1.8
SEC13-219ENST00000492602 HDHD3Q9BSH5 251 aaPredicted RBP3.82□□□□□ -1.8
SEC13-219ENST00000492602 SLC2A9Q9NRM0 540 aa3.82□□□□□ -1.8
SEC13-219ENST00000492602 FAM212BQ9NTI7 297 aaPredicted RBP3.82□□□□□ -1.8
SEC13-219ENST00000492602 NDUFB11Q9NX14 153 aa3.82□□□□□ -1.8
SEC13-219ENST00000492602 ZNF230Q9UIE0 474 aaPredicted RBP3.82□□□□□ -1.8
SEC13-219ENST00000492602 DAPK2Q9UIK4 370 aa3.82□□□□□ -1.8
SEC13-219ENST00000492602 SPATA2Q9UM82 520 aa3.82□□□□□ -1.8
SEC13-219ENST00000492602 LSM2Q9Y333 95 aaKnown RBP3.82□□□□□ -1.8
SEC13-219ENST00000492602 RRP15Q9Y3B9 282 aaKnown RBP3.82□□□□□ -1.8
SEC13-219ENST00000492602 UFC1Q9Y3C8 167 aa3.82□□□□□ -1.8
SEC13-219ENST00000492602 ETV7Q9Y603 341 aa3.82□□□□□ -1.8
SEC13-219ENST00000492602 TRAV18A0A075B6X5 111 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 A0A0A6YYD4 124 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 A0A1B0GW64 132 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 TSPAN4O14817 238 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 HPRT1P00492 218 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 HLA-DQB1P01920 261 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 CD5P06127 495 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 NQO2P16083 231 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 FCGR2CP31995 323 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 DUTP33316 252 aaKnown RBP3.81□□□□□ -1.8
SEC13-219ENST00000492602 ARL3P36405 182 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 RPL27AP46776 148 aaKnown RBP3.81□□□□□ -1.8
SEC13-219ENST00000492602 ELLP55199 621 aaPredicted RBP3.81□□□□□ -1.8
SEC13-219ENST00000492602 TAS2R31P59538 309 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 TAS2R46P59540 309 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 TSPAN5P62079 268 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 RPL8P62917 257 aaKnown RBP3.81□□□□□ -1.8
SEC13-219ENST00000492602 PAFAH1B2P68402 229 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 PJVKQ0ZLH3 352 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 MSMO1Q15800 293 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 C15orf32Q32M92 178 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 PLAC9Q5JTB6 97 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 LAIR2Q6ISS4 152 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 CDPF1Q6NVV7 123 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 PLET1Q6UQ28 207 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 C19orf35Q6ZS72 473 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 TMEM17Q86X19 198 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 GPHB5Q86YW7 130 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 H1FOOQ8IZA3 346 aaPredicted RBP3.81□□□□□ -1.8
SEC13-219ENST00000492602 MFSD4AQ8N468 514 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 BEST4Q8NFU0 473 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 OR6F1Q8NGZ6 308 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 SECTM1Q8WVN6 248 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 C5orf30Q96GV9 206 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 TMEM56Q96MV1 263 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 TSC22D3Q99576 134 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 CABLES2Q9BTV7 478 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 SLC5A7Q9GZV3 580 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 AKIP1Q9NQ31 210 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 ANXA10Q9UJ72 324 aa3.81□□□□□ -1.8
SEC13-219ENST00000492602 RBMX2Q9Y388 322 aaKnown RBP3.81□□□□□ -1.8
SEC13-219ENST00000492602 LOC100506127A0A0U1RQW1 187 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 OR4C46A6NHA9 309 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 C15orf61A6NNL5 157 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 NPIPB5A8MRT5 1133 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 A8MWP6 167 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 RAB27BO00194 218 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 MFNGO00587 321 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 RBFOX2O43251 390 aaKnown RBP eCLIP3.8□□□□□ -1.8
SEC13-219ENST00000492602 OR2J3O76001 311 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 KBTBD11O94819 623 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 PRH1P02810 166 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 CLEC3BP05452 202 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 EIF4EP06730 217 aaKnown RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 SERPINE2P07093 398 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 FGF2P09038 288 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 HLA-GP17693 338 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 NFYAP23511 347 aaPredicted RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 PSMB6P28072 239 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 SUB1P53999 127 aaKnown RBP eCLIP3.8□□□□□ -1.81e-7■■■■■ 110.7
SEC13-219ENST00000492602 RELQ04864 619 aaPredicted RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 PLA2G7Q13093 441 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 KIR3DS1Q14943 382 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 OR2B11Q5JQS5 317 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 SLC25A24Q6NUK1 477 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 MZT2AQ6P582 158 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 IDO2Q6ZQW0 420 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 SPAG16Q8N0X2 631 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 OR1L8Q8NGR8 309 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 OR4A16Q8NH70 328 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 C15orf40Q8WUR7 153 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 GIMAP1Q8WWP7 306 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 MAFIPQ8WZ33 124 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 NARS2Q96I59 477 aaKnown RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 C5orf66Q9H5L9 145 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 TXNL4BQ9NX01 149 aaKnown RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 RHBDL2Q9NX52 303 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 TAS2R8Q9NYW2 309 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 MRPL27Q9P0M9 148 aaKnown RBP3.8□□□□□ -1.8
SEC13-219ENST00000492602 CACFD1Q9UGQ2 172 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 DMRT1Q9Y5R6 373 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 X6R8D5 127 aa3.8□□□□□ -1.8
SEC13-219ENST00000492602 TRBV9A0A0B4J1U6 114 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 PIGBOS1A0A0B4J2F0 54 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 IGKV1-6A0A0C4DH72 117 aa3.79□□□□□ -1.8
SEC13-219ENST00000492602 TMEM235A6NFC5 223 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms