RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 HOXD3P31249 432 aaPredicted RBP19.82■□□□□ 0.76
TTC3-223ENST00000492275 FAM219AQ8IW50 185 aa19.82■□□□□ 0.76
TTC3-223ENST00000492275 RNASE11Q8TAA1 199 aaKnown RBP19.82■□□□□ 0.76
TTC3-223ENST00000492275 CCDC32Q9BV29 185 aa19.82■□□□□ 0.76
TTC3-223ENST00000492275 CENPXA8MT69 81 aa19.81■□□□□ 0.76
TTC3-223ENST00000492275 OVOL1O14753 267 aa19.81■□□□□ 0.76
TTC3-223ENST00000492275 MECP2P51608 486 aaKnown RBP19.81■□□□□ 0.76
TTC3-223ENST00000492275 SPINK9Q5DT21 86 aa19.81■□□□□ 0.76
TTC3-223ENST00000492275 OR2C3Q8N628 320 aa19.81■□□□□ 0.76
TTC3-223ENST00000492275 SLC35G3Q8N808 338 aa19.81■□□□□ 0.76
TTC3-223ENST00000492275 F11RQ9Y624 299 aaKnown RBP19.81■□□□□ 0.76
TTC3-223ENST00000492275 S4R3C0 116 aa19.81■□□□□ 0.76
TTC3-223ENST00000492275 SEC14L6B5MCN3 397 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 IGHV3-23P01764 117 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 ANXA3P12429 323 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 ZP3P21754 424 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 SLC25A24Q6NUK1 477 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 CENPSQ8N2Z9 138 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 FLVCR2Q9UPI3 526 aa19.8■□□□□ 0.76
TTC3-223ENST00000492275 WIPF1O43516 503 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 PRB2P02812 416 aaPredicted RBP19.79■□□□□ 0.76
TTC3-223ENST00000492275 PPP1R1AQ13522 171 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 AARDQ4LEZ3 155 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 LYZL2Q7Z4W2 148 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 LGI3Q8N145 548 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 CCDC140Q96MF4 163 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 GPR61Q9BZJ8 451 aa19.79■□□□□ 0.76
TTC3-223ENST00000492275 MFSD2BA6NFX1 497 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 BMPR1BO00238 502 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 SFT2D2O95562 160 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 IFNA17P01571 189 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 KRTAP10-11P60412 298 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 KLF5Q13887 457 aaPredicted RBP19.78■□□□□ 0.76
TTC3-223ENST00000492275 ANKRD55Q3KP44 614 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 C9orf66Q5T8R8 295 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 EEF1AKMT3Q96AZ1 226 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 PLEKHA3Q9HB20 300 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.78■□□□□ 0.76
TTC3-223ENST00000492275 CACNG5Q9UF02 275 aa19.78■□□□□ 0.76
TTC3-223ENST00000492275 A0A0B4J2A0 478 aa19.77■□□□□ 0.76
TTC3-223ENST00000492275 LYRM1O43325 122 aa19.77■□□□□ 0.76
TTC3-223ENST00000492275 VAMP1P23763 118 aa19.77■□□□□ 0.76
TTC3-223ENST00000492275 EGFEM1PQ0D2K5 195 aa19.77■□□□□ 0.76
TTC3-223ENST00000492275 THYN1Q9P016 225 aa19.77■□□□□ 0.76
TTC3-223ENST00000492275 SHPKQ9UHJ6 478 aa19.77■□□□□ 0.76
TTC3-223ENST00000492275 PPP5D1E7EU14 171 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 INS-IGF2F8WCM5 200 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 CYB5BO43169 146 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 SRPXP78539 464 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 NMSQ5H8A3 153 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 CLEC19AQ6UXS0 136 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 OR1P1Q8NH06 330 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 OR52E5Q8NH55 327 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 CXorf58Q96LI9 332 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 PDCD10Q9BUL8 212 aa19.76■□□□□ 0.75
TTC3-223ENST00000492275 MEGF8Q7Z7M0 2845 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 UBE2MP61081 183 aaKnown RBP19.75■□□□□ 0.75
TTC3-223ENST00000492275 ERHP84090 104 aaKnown RBP19.75■□□□□ 0.75
TTC3-223ENST00000492275 ZNF846Q147U1 533 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 RPEL1Q2QD12 228 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 FAM209BQ5JX69 171 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 ACSM6Q6P461 480 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 LRTM2Q8N967 370 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 ZNF114Q8NC26 417 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 OR1L6Q8NGR2 347 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 ZNF502Q8TBZ5 544 aa19.75■□□□□ 0.75
TTC3-223ENST00000492275 TRBV7-1A0A0A6YYK4 115 aa19.74■□□□□ 0.75
TTC3-223ENST00000492275 SYNJ2BPP57105 145 aa19.74■□□□□ 0.75
TTC3-223ENST00000492275 SPCS3P61009 180 aa19.74■□□□□ 0.75
TTC3-223ENST00000492275 VN1R17PQ8TDU5 208 aa19.74■□□□□ 0.75
TTC3-223ENST00000492275 WDR12Q9GZL7 423 aaKnown RBP19.74■□□□□ 0.75
TTC3-223ENST00000492275 DNAH3Q8TD57 4116 aa19.74■□□□□ 0.75
TTC3-223ENST00000492275 K7EIM0 57 aa19.73■□□□□ 0.75
TTC3-223ENST00000492275 HLA-AP01891 365 aaKnown RBP19.73■□□□□ 0.75
TTC3-223ENST00000492275 SULT1A3P0DMM9 295 aa19.73■□□□□ 0.75
TTC3-223ENST00000492275 SULT1A4P0DMN0 295 aa19.73■□□□□ 0.75
TTC3-223ENST00000492275 PDLIM3Q53GG5 364 aaPredicted RBP19.73■□□□□ 0.75
TTC3-223ENST00000492275 AURKAIP1Q9NWT8 199 aaPredicted RBP19.73■□□□□ 0.75
TTC3-223ENST00000492275 IGHV3-21A0A0B4J1V1 117 aa19.72■□□□□ 0.75
TTC3-223ENST00000492275 C9orf170A2RU37 121 aa19.72■□□□□ 0.75
TTC3-223ENST00000492275 CLEC3BP05452 202 aa19.72■□□□□ 0.75
TTC3-223ENST00000492275 ANXA7P20073 488 aaKnown RBP19.72■□□□□ 0.75
TTC3-223ENST00000492275 IL34Q6ZMJ4 242 aa19.72■□□□□ 0.75
TTC3-223ENST00000492275 SCARB1Q8WTV0 552 aa19.72■□□□□ 0.75
TTC3-223ENST00000492275 TBC1D24Q9ULP9 559 aa19.72■□□□□ 0.75
TTC3-223ENST00000492275 DUXBA0A1W2PPF3 345 aa19.71■□□□□ 0.75
TTC3-223ENST00000492275 GGCTO75223 188 aaKnown RBP19.71■□□□□ 0.75
TTC3-223ENST00000492275 OR2C1O95371 312 aa19.71■□□□□ 0.75
TTC3-223ENST00000492275 ARL3P36405 182 aa19.71■□□□□ 0.75
TTC3-223ENST00000492275 HOXA1P49639 335 aaPredicted RBP19.71■□□□□ 0.75
TTC3-223ENST00000492275 INSL3P51460 131 aa19.71■□□□□ 0.75
TTC3-223ENST00000492275 SMCO1Q147U7 214 aa19.71■□□□□ 0.75
TTC3-223ENST00000492275 OR9G4Q8NGQ1 327 aa19.71■□□□□ 0.75
TTC3-223ENST00000492275 SAP30O75446 220 aa19.7■□□□□ 0.74
TTC3-223ENST00000492275 TCRBP04435 133 aa19.7■□□□□ 0.74
TTC3-223ENST00000492275 OR4E1P0C645 316 aa19.7■□□□□ 0.74
TTC3-223ENST00000492275 RNASE2P10153 161 aaKnown RBP19.7■□□□□ 0.74
TTC3-223ENST00000492275 PVRIGQ6DKI7 326 aa19.7■□□□□ 0.74
TTC3-223ENST00000492275 MISP3Q96FF7 219 aa19.7■□□□□ 0.74
TTC3-223ENST00000492275 PIGBOS1A0A0B4J2F0 54 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms