RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 RTL8CO15255 209 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 XRCC3O43542 346 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 RAB6AP20340 208 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 TALDO1P37837 337 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 TCTAP57738 103 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 IFITM3Q01628 133 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 VN1R17PQ8TDU5 208 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 NUDCD2Q8WVJ2 157 aa9.63□□□□□ -0.87
USF1-206ENST00000491629 IFITM5A6NNB3 132 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 K7EMT4 169 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 UPK2O00526 184 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 TNFSF12O43508 249 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 SSX5O60225 188 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 UPK1BO75841 260 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 SLC22A5O76082 557 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 HRASP01112 189 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 HSMCR30P0CW71 290 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 PTHLHP12272 177 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 POU2AF1Q16633 256 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 CDNFQ49AH0 187 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 ZNF66Q6ZN08 573 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 LINC00336Q6ZUF6 198 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 Q8NAQ8 132 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 BSCL2Q96G97 398 aaPredicted RBP9.62□□□□□ -0.87
USF1-206ENST00000491629 C20orf24Q9BUV8 137 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 NAA50Q9GZZ1 169 aaKnown RBP9.62□□□□□ -0.87
USF1-206ENST00000491629 CCL28Q9NRJ3 127 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 SMPXQ9UHP9 88 aa9.62□□□□□ -0.87
USF1-206ENST00000491629 IGHV3-49A0A0A0MS15 119 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 CENPXA8MT69 81 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 CHEK1O14757 476 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 GABARAPO95166 117 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 SERPINE2P07093 398 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 GIG44P09565 113 aaPredicted RBP9.61□□□□□ -0.87
USF1-206ENST00000491629 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
USF1-206ENST00000491629 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 TFPI2P48307 235 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
USF1-206ENST00000491629 TRAM1Q15629 374 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 HACD4Q5VWC8 232 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 FAM90A2PQ658T7 463 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 CNIH2Q6PI25 160 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 ZNF767PQ75MW2 155 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 GDPD1Q8N9F7 314 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 OR4A5Q8NH83 315 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 SCARB1Q8WTV0 552 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 CENPOQ9BU64 300 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 HRASLSQ9HDD0 168 aa9.61□□□□□ -0.87
USF1-206ENST00000491629 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 TMEM235A6NFC5 223 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 K7EIM0 57 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 MRPS14O60783 128 aaKnown RBP9.6□□□□□ -0.87
USF1-206ENST00000491629 CCNKO75909 580 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 CTSGP08311 255 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 CTXN2P0C2S0 81 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 MLLT11Q13015 90 aaPredicted RBP9.6□□□□□ -0.87
USF1-206ENST00000491629 SSX1Q16384 188 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 SPSB3Q6PJ21 355 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 LYSMD2Q8IV50 215 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 SPAG16Q8N0X2 631 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 OR6F1Q8NGZ6 308 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 SRSF8Q9BRL6 282 aaKnown RBP9.6□□□□□ -0.87
USF1-206ENST00000491629 QTRT1Q9BXR0 403 aaKnown RBP9.6□□□□□ -0.87
USF1-206ENST00000491629 ATG5Q9H1Y0 275 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 DCSTAMPQ9H295 470 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 DUSP21Q9H596 190 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 ANXA10Q9UJ72 324 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
USF1-206ENST00000491629 IGKV3-7A0A075B6H7 116 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 TRAV1-2A0A0B4J238 106 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 TEX50A0A1B0GTY4 177 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 C15orf62A8K5M9 175 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 SULT1C2O00338 296 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 RBFOX2O43251 390 aaKnown RBP eCLIP9.59□□□□□ -0.87
USF1-206ENST00000491629 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
USF1-206ENST00000491629 OR13C7P0DN81 318 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 PSMA1P25786 263 aaKnown RBP9.59□□□□□ -0.87
USF1-206ENST00000491629 DEFA1P59665 94 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 DEFA3P59666 94 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 SLC25A24Q6NUK1 477 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 LILRB2Q8N423 598 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 MGLLQ99685 303 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 RHPN1-AS1Q9BWJ2 59 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 TMEM140Q9NV12 185 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 C21orf62Q9NYP8 219 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 THYN1Q9P016 225 aa9.59□□□□□ -0.87
USF1-206ENST00000491629 IGHV4-4A0A075B6R2 117 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 IGHV3OR16-13A0A075B7E8 117 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 IGHV3-74A0A0B4J1X5 117 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 SMIM30A4D0T7 59 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 METTL21EPA6NDL7 271 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 PRSS29PA6NIE9 313 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 C11orf94C9JXX5 98 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 HLA-DMBP28068 263 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 TAS2R31P59538 309 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 S100A12P80511 92 aa9.58□□□□□ -0.88
USF1-206ENST00000491629 NEDD8Q15843 81 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms