RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 C3orf36Q3SXR2 165 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 Q96MF0 132 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 PGPA6NDG6 321 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 MSMBP08118 114 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 BSXQ3C1V8 233 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 LDLRAD3Q86YD5 345 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 FOXA2Q9Y261 457 aaPredicted RBP11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 SRD5A1P18405 259 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 UQCC3Q6UW78 93 aa11.9□□□□□ -0.5
ARHGEF39-205ENST00000490638 H3BTX0 84 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 CLDN34H7C241 214 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 RAB9AP51151 201 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 CLEC19AQ6UXS0 136 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 Q6ZR03 302 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 IFI27L2Q9H2X8 130 aa11.9□□□□□ -0.51
ARHGEF39-205ENST00000490638 UPK2O00526 184 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 EIF3GO75821 320 aaKnown RBP eCLIP11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 DDB2Q92466 427 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 P01737 135 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 CLDND2Q8NHS1 167 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 DMRTA2Q96SC8 542 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 NABP2Q9BQ15 211 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 NPFFO15130 113 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 NAPSAO96009 420 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 TCL1AP56279 114 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 MINOS1Q5TGZ0 78 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 GATAD1Q8WUU5 269 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 RAB24Q969Q5 203 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 COQ2Q96H96 371 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 MINOS1-NBL1R4GNA1 71 aa11.89□□□□□ -0.51
ARHGEF39-205ENST00000490638 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 DLX6P56179 175 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 IGSF23A1L1A6 192 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 M0R1W7 72 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 NDUFS7O75251 213 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 PRTN3P24158 256 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 RNF138Q8WVD3 245 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 NCOA6Q14686 2063 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 DOPEY1Q5JWR5 2465 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 RAMP3O60896 148 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 ZNF324BQ6AW86 544 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 CHAC2Q8WUX2 184 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 NAT8BQ9UHF3 227 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 DLK1P80370 383 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 DMRTC2Q8IXT2 367 aaPredicted RBP11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 OR10G8Q8NGN5 311 aa11.88□□□□□ -0.51
ARHGEF39-205ENST00000490638 ELOA3CA0A087WX78 387 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 OOSP1A8MZH6 123 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 SRSF10O75494 262 aaKnown RBP11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 CXCL2P19875 107 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 TEX45Q8NA69 505 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 PLXNB3Q9ULL4 1909 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 SOD3P08294 240 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 RAB5AP20339 215 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 Q6P435 159 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 RRHO14718 337 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 SLC31A2O15432 143 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 IGKV3-20P01619 116 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 EFNB3Q15768 340 aa11.87□□□□□ -0.51
ARHGEF39-205ENST00000490638 HSBP1O75506 76 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 RHOGP84095 191 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 TPTE2P1Q5T6R2 138 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 IGLV3-9A0A075B6K5 115 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 IGHV3-66A0A0C4DH42 116 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 PDE6DO43924 150 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 WISP2O76076 250 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 SNRPD3P62318 126 aaKnown RBP11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 DGAT2L7PQ6IED9 249 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 MOB4Q9Y3A3 225 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 LDLRAD4O15165 306 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 TUBA4BQ9H853 241 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 PRUNE2Q8WUY3 3088 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 IGHV1-3A0A0C4DH29 117 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 SAA4P35542 130 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 Q8NA96 180 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 HS3ST6Q96QI5 342 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 ZNF581Q9P0T4 197 aa11.86□□□□□ -0.51
ARHGEF39-205ENST00000490638 MPTX1A8MV57 137 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 OR9G9P0C7N8 305 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 Q5BKY6 102 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 NAT8Q9UHE5 227 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 TNCP24821 2201 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 Q71RC1 249 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 RAX2Q96IS3 184 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 ALPK3Q96L96 1907 aa11.85□□□□□ -0.51
ARHGEF39-205ENST00000490638 GATA4P43694 442 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms