RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 C3orf56Q8N813 242 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 OR1P1Q8NH06 330 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 USMG5Q96IX5 58 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 UBE2E2Q96LR5 201 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 F11RQ9Y624 299 aaKnown RBP9.73□□□□□ -0.85
HDAC1-210ENST00000490081 ALG5Q9Y673 324 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 U3KQ87 197 aa9.73□□□□□ -0.85
HDAC1-210ENST00000490081 FAM223BA6NKX1 122 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 MPTX1A8MV57 137 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC1-210ENST00000490081 RUNX1Q01196 453 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 TMEM65Q6PI78 240 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 NOXA1Q86UR1 476 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 NDUFA11Q86Y39 141 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 FAM223AQ8IWN6 122 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 ZNF491Q8N8L2 437 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 ZBTB8BQ8NAP8 495 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-210ENST00000490081 NECAP1Q8NC96 275 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 ASB13Q8WXK3 278 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 FANCD2OSQ96PS1 177 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-210ENST00000490081 ATP6V0BQ99437 205 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 NMES1Q9C002 83 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 HIPK2Q9H2X6 1198 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 THYN1Q9P016 225 aa9.72□□□□□ -0.85
HDAC1-210ENST00000490081 TSSC4Q9Y5U2 329 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-210ENST00000490081 IGLV11-55A0A075B6I3 123 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 SYNGR2O43760 224 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 CD28P10747 220 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 HTR2BP41595 481 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 NKX2-1P43699 371 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-210ENST00000490081 TAS2R30P59541 319 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 C2orf68Q2NKX9 166 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 C2orf83Q53S99 150 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 UXS1Q8NBZ7 420 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 DTD1Q8TEA8 209 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 HINT2Q9BX68 163 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 KLK15Q9H2R5 256 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 RBKSQ9H477 322 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 ENY2Q9NPA8 101 aa9.71□□□□□ -0.86
HDAC1-210ENST00000490081 TCRBV4S1A1TA0A5B7 111 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 C5orf51A6NDU8 294 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 CEBPZOSA8MTT3 80 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 CORTO00230 105 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 SSNA1O43805 119 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 RPLP1P05386 114 aaKnown RBP9.7□□□□□ -0.86
HDAC1-210ENST00000490081 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
HDAC1-210ENST00000490081 PF4V1P10720 104 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 SNCAP37840 140 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 RPL23AP62750 156 aaKnown RBP9.7□□□□□ -0.86
HDAC1-210ENST00000490081 VN1R17PQ8TDU5 208 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 SMIM8Q96KF7 97 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 RAB40CQ96S21 281 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 P2RX4Q99571 388 aa9.7□□□□□ -0.86
HDAC1-210ENST00000490081 HEYLQ9NQ87 328 aaPredicted RBP9.7□□□□□ -0.86
HDAC1-210ENST00000490081 C13orf42A0A1B0GVH6 325 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 MBPP02686 304 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-210ENST00000490081 TRGV3P03979 118 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 APELAP0DMC3 54 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 DEFA4P12838 97 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 FCGR2BP31994 310 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-210ENST00000490081 HOXA1P49639 335 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-210ENST00000490081 MFAP2P55001 183 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 RPP30P78346 268 aaKnown RBP9.69□□□□□ -0.86
HDAC1-210ENST00000490081 ZNF343Q6P1L6 599 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 Q6ZNX1 250 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 CXorf58Q96LI9 332 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 CITED2Q99967 270 aaPredicted RBP9.69□□□□□ -0.86
HDAC1-210ENST00000490081 MED28Q9H204 178 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 DMRT1Q9Y5R6 373 aa9.69□□□□□ -0.86
HDAC1-210ENST00000490081 I3L521 148 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 CCSO14618 274 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 H2BFSP57053 126 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 TPPP2P59282 170 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 RRAS2P62070 204 aaPredicted RBP9.68□□□□□ -0.86
HDAC1-210ENST00000490081 RHOGP84095 191 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 RNASEH2CQ8TDP1 164 aaKnown RBP9.68□□□□□ -0.86
HDAC1-210ENST00000490081 C4orf3Q8WVX3 66 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 C11orf1Q9H5F2 150 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 ZNF355PQ9NSJ1 428 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 GSKIPQ9P0R6 139 aa9.68□□□□□ -0.86
HDAC1-210ENST00000490081 TRBV7-1A0A0A6YYK4 115 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 FAM25EA8MYX2 175 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 GOSR2O14653 212 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 REG1AP05451 166 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 PAX9P55771 341 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 POLR2GP62487 172 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC1-210ENST00000490081 ATP5G2Q06055 141 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 EXOSC2Q13868 293 aaKnown RBP9.67□□□□□ -0.86
HDAC1-210ENST00000490081 SPINK9Q5DT21 86 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 SLC25A24Q6NUK1 477 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 SLC24A4Q8NFF2 622 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 MS4A10Q96PG2 267 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 TXN2Q99757 166 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 MGAT4CQ9UBM8 478 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 FBXL7Q9UJT9 491 aa9.67□□□□□ -0.86
HDAC1-210ENST00000490081 I3L2K1 104 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms