RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 CD83Q01151 205 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 KIAA0141Q14154 515 aaPredicted RBP12.54□□□□□ -0.4
CLIC4-203ENST00000489758 BSXQ3C1V8 233 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 C12orf54Q6X4T0 127 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 Q6ZNX1 250 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 C11orf44Q8N8P7 122 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 ZNF114Q8NC26 417 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 CITED1Q99966 193 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 ZNF747Q9BV97 191 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 MGAT4CQ9UBM8 478 aa12.54□□□□□ -0.4
CLIC4-203ENST00000489758 F11RQ9Y624 299 aaKnown RBP12.54□□□□□ -0.4
CLIC4-203ENST00000489758 TRBV9A0A0B4J1U6 114 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 CEBPZOSA8MTT3 80 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 MBPP02686 304 aaPredicted RBP12.53□□□□□ -0.4
CLIC4-203ENST00000489758 RPLP1P05386 114 aaKnown RBP12.53□□□□□ -0.4
CLIC4-203ENST00000489758 PF4V1P10720 104 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 CXCL3P19876 107 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 RAB9AP51151 201 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 FCN2Q15485 313 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 MRPL41Q8IXM3 137 aaKnown RBP12.53□□□□□ -0.4
CLIC4-203ENST00000489758 OR11H7Q8NGC8 314 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 DTD1Q8TEA8 209 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 MS4A10Q96PG2 267 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 P2RX4Q99571 388 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 MAGT1Q9H0U3 335 aa12.53□□□□□ -0.4
CLIC4-203ENST00000489758 IGLV11-55A0A075B6I3 123 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 SYNGR2O43760 224 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 RNASE2P10153 161 aaKnown RBP12.52□□□□□ -0.41
CLIC4-203ENST00000489758 NKX2-1P43699 371 aaPredicted RBP12.52□□□□□ -0.41
CLIC4-203ENST00000489758 POLR2GP62487 172 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLIC4-203ENST00000489758 ERHP84090 104 aaKnown RBP12.52□□□□□ -0.41
CLIC4-203ENST00000489758 OR1P1Q8NH06 330 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
CLIC4-203ENST00000489758 CITED2Q99967 270 aaPredicted RBP12.52□□□□□ -0.41
CLIC4-203ENST00000489758 MED28Q9H204 178 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 SLA2Q9H6Q3 261 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 ENY2Q9NPA8 101 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.41
CLIC4-203ENST00000489758 TENM1Q9UKZ4 2725 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 ADARB2-AS1A8MUL3 147 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 TRGV3P03979 118 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 IAPPP10997 89 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 TPPP2P59282 170 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 RRAS2P62070 204 aaPredicted RBP12.51□□□□□ -0.41
CLIC4-203ENST00000489758 DEFA5Q01523 94 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 TMEM65Q6PI78 240 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 ZNF491Q8N8L2 437 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 TMEM170AQ8WVE7 144 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 NMES1Q9C002 83 aa12.51□□□□□ -0.41
CLIC4-203ENST00000489758 HEYLQ9NQ87 328 aaPredicted RBP12.51□□□□□ -0.41
CLIC4-203ENST00000489758 RCL1Q9Y2P8 373 aaKnown RBP12.51□□□□□ -0.41
CLIC4-203ENST00000489758 TCRBV4S1A1TA0A5B7 111 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 MED6O75586 246 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 TMEM50AO95807 157 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 SCGB1D2O95969 90 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 DEFA4P12838 97 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 RHOGP84095 191 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 NECAP1Q8NC96 275 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 HIPK2Q9H2X6 1198 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 TNCP24821 2201 aa12.5□□□□□ -0.41
CLIC4-203ENST00000489758 PLXNB1O43157 2135 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 FAM223BA6NKX1 122 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 K7EPK0 472 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 SSSCA1O60232 199 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 OR2J3O76001 311 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 NDUFB8O95169 186 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 HIST1H1BP16401 226 aaKnown RBP12.49□□□□□ -0.41
CLIC4-203ENST00000489758 SNCAP37840 140 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 HTR2BP41595 481 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 PAX9P55771 341 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 RPL23AP62750 156 aaKnown RBP12.49□□□□□ -0.41
CLIC4-203ENST00000489758 C2orf83Q53S99 150 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 C18orf65Q6ZTR6 163 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 FAM223AQ8IWN6 122 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 SLC24A4Q8NFF2 622 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 OR1L6Q8NGR2 347 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 UBE2E2Q96LR5 201 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 C11orf1Q9H5F2 150 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 ZFP57Q9NU63 452 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
CLIC4-203ENST00000489758 TSSC4Q9Y5U2 329 aaPredicted RBP12.49□□□□□ -0.41
CLIC4-203ENST00000489758 WRBO00258 174 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
CLIC4-203ENST00000489758 RAB32Q13637 225 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 SLC25A24Q6NUK1 477 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 SHISA2Q6UWI4 295 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 NDUFA11Q86Y39 141 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 CIB3Q96Q77 187 aaPredicted RBP12.48□□□□□ -0.41
CLIC4-203ENST00000489758 GNB4Q9HAV0 340 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 U3KQ87 197 aa12.48□□□□□ -0.41
CLIC4-203ENST00000489758 C15orf62A8K5M9 175 aa12.47□□□□□ -0.41
CLIC4-203ENST00000489758 K7EIM0 57 aa12.47□□□□□ -0.41
CLIC4-203ENST00000489758 LY86O95711 162 aa12.47□□□□□ -0.41
CLIC4-203ENST00000489758 NPY1RP25929 384 aa12.47□□□□□ -0.41
CLIC4-203ENST00000489758 SUB1P53999 127 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLIC4-203ENST00000489758 CYCSP99999 105 aaKnown RBP12.47□□□□□ -0.41
CLIC4-203ENST00000489758 C15orf32Q32M92 178 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms