RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 AREGP15514 252 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 UBA52P62987 128 aaKnown RBP16.54■□□□□ 0.24
SND1-214ENST00000489417 NDPQ00604 133 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 SLC38A11Q08AI6 406 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 C2orf83Q53S99 150 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 RPL7L1Q6DKI1 246 aaKnown RBP16.54■□□□□ 0.24
SND1-214ENST00000489417 ETV3LQ6ZN32 361 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 OR10P1Q8NGE3 313 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 SSMEM1Q8WWF3 244 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 TNCP24821 2201 aa16.54■□□□□ 0.24
SND1-214ENST00000489417 M0QZK8 103 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 LILRB2Q8N423 598 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 SMR3AQ99954 134 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 HSPB9Q9BQS6 159 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 TEX15Q9BXT5 2789 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 BORCS7-ASMTA0A0B4J1R7 106 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 DFFBO76075 338 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 LY6G6DO95868 133 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 AMY1AP04745 511 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 IFNA4P05014 189 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 REG1AP05451 166 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 APELAP0DMC3 54 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 SUB1P53999 127 aaKnown RBP eCLIP16.53■□□□□ 0.244e-12■■■■■ 60.7
SND1-214ENST00000489417 STOML3Q8TAV4 291 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 ST8SIA2Q92186 375 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 PINX1Q96BK5 328 aaKnown RBP16.53■□□□□ 0.24
SND1-214ENST00000489417 ATP5SQ99766 215 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 FAM103A1Q9BTL3 118 aaKnown RBP16.53■□□□□ 0.24
SND1-214ENST00000489417 TMUB1Q9BVT8 246 aa16.53■□□□□ 0.24
SND1-214ENST00000489417 MYO9AB2RTY4 2548 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 SH2D7A6NKC9 451 aaPredicted RBP16.52■□□□□ 0.23
SND1-214ENST00000489417 JTBO76095 146 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 TPT1P13693 172 aaKnown RBP16.52■□□□□ 0.23
SND1-214ENST00000489417 EIF5AP63241 154 aaKnown RBP16.52■□□□□ 0.23
SND1-214ENST00000489417 ATP6V1FQ16864 119 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 TUSC1Q2TAM9 212 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 SIGLECL1Q8N7X8 197 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 ZNF114Q8NC26 417 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 P2RX4Q99571 388 aa16.52■□□□□ 0.23
SND1-214ENST00000489417 PRSS46E5RG02 174 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 CD99P14209 185 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 FOSL1P15407 271 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 ZNF266Q14584 549 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 PARP11Q9NR21 331 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 VPREB3Q9UKI3 123 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 FBXO7Q9Y3I1 522 aa16.51■□□□□ 0.23
SND1-214ENST00000489417 CELSR1Q9NYQ6 3014 aa16.5■□□□□ 0.23
SND1-214ENST00000489417 HOXA3O43365 443 aaPredicted RBP16.5■□□□□ 0.23
SND1-214ENST00000489417 CFDP00746 253 aaPredicted RBP16.5■□□□□ 0.23
SND1-214ENST00000489417 EGR2P11161 476 aaPredicted RBP16.5■□□□□ 0.23
SND1-214ENST00000489417 TEX261Q6UWH6 196 aa16.5■□□□□ 0.23
SND1-214ENST00000489417 UBAC2Q8NBM4 344 aa16.5■□□□□ 0.23
SND1-214ENST00000489417 TMEM147Q9BVK8 224 aa16.5■□□□□ 0.23
SND1-214ENST00000489417 TNFRSF19Q9NS68 423 aa16.5■□□□□ 0.23
SND1-214ENST00000489417 CSPG4Q6UVK1 2322 aa16.49■□□□□ 0.23
SND1-214ENST00000489417 DLK1P80370 383 aa16.49■□□□□ 0.23
SND1-214ENST00000489417 BAP18Q8IXM2 172 aa16.49■□□□□ 0.23
SND1-214ENST00000489417 F11RQ9Y624 299 aaKnown RBP16.49■□□□□ 0.23
SND1-214ENST00000489417 OTOGQ6ZRI0 2925 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 ATP6V0E1O15342 81 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 IFNA5P01569 189 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 CTRB1P17538 263 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 C9orf152Q5JTZ5 239 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 ASPHD1Q5U4P2 390 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 PVRIGQ6DKI7 326 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 CTRB2Q6GPI1 263 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 OR1P1Q8NH06 330 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 SGMS2Q8NHU3 365 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 GGACTQ9BVM4 153 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 ARV1Q9H2C2 271 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 UQCC1Q9NVA1 299 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 NOTCH2Q04721 2471 aa16.48■□□□□ 0.23
SND1-214ENST00000489417 CYSRT1A8MQ03 144 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 NPIPB5A8MRT5 1133 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 SCGB2A2Q13296 93 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 VWC2Q2TAL6 325 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 SLC25A24Q6NUK1 477 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 C19orf35Q6ZS72 473 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 ZNF680Q8NEM1 530 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 LFNGQ8NES3 379 aa16.47■□□□□ 0.23
SND1-214ENST00000489417 RNASEH2CQ8TDP1 164 aaKnown RBP16.47■□□□□ 0.23
SND1-214ENST00000489417 ZNF469Q96JG9 3925 aaPredicted RBP16.47■□□□□ 0.23
SND1-214ENST00000489417 UBE2L5PA0A1B0GUS4 154 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 LINC01548A6NM66 108 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 RGS13O14921 159 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 IFNA7P01567 189 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 CRYGCP07315 174 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 MFAP2P55001 183 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 EXOSC2Q13868 293 aaKnown RBP16.46■□□□□ 0.23
SND1-214ENST00000489417 TTC9CQ8N5M4 171 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 TMEM86BQ8N661 226 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 GINS3Q9BRX5 216 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 WNT10AQ9GZT5 417 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 PLXNB1O43157 2135 aa16.46■□□□□ 0.23
SND1-214ENST00000489417 FBXO24O75426 580 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 BLCAPP62952 87 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 UNQ5815/PRO19632Q6UWF5 114 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 RBMS3Q6XE24 437 aaKnown RBP16.45■□□□□ 0.22
SND1-214ENST00000489417 ZNF767PQ75MW2 155 aa16.45■□□□□ 0.22
SND1-214ENST00000489417 HSD17B11Q8NBQ5 300 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms