RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 HINT2Q9BX68 163 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 MEGF9Q9H1U4 602 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 MED9Q9NWA0 146 aa6.86□□□□□ -1.31
NUDCD3-209ENST00000487118 IGLC7A0M8Q6 106 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 FNDC10F2Z333 226 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 FBXO24O75426 580 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 CA2P00918 260 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 AVPP01185 164 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 FSHBP01225 129 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 IFNA5P01569 189 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 FAM106CPP0CH98 169 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 IGHV4-38-2P0DP08 117 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 TMEM11P17152 192 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 MDKP21741 143 aaPredicted RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 CD24P25063 80 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 BPIFB3P59826 476 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 ERHP84090 104 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 WT1-ASQ06250 92 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 HES1Q14469 280 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 TNXAQ16473 311 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 C5orf64Q2M2E5 130 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 FAM120AOSQ5T036 256 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 PVRIGQ6DKI7 326 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 HSD17B13Q7Z5P4 300 aaPredicted RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 CENPVQ7Z7K6 275 aaPredicted RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 SLC7A5P1Q8MH63 180 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 HSD17B11Q8NBQ5 300 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 ZNF114Q8NC26 417 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 OR10W1Q8NGF6 305 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 RNF141Q8WVD5 230 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 PCNPQ8WW12 178 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 FOXC2Q99958 501 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 WDR61Q9GZS3 305 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 SH3BGRL3Q9H299 93 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 UQCC1Q9NVA1 299 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 KIAA1456Q9P272 454 aa6.85□□□□□ -1.31
NUDCD3-209ENST00000487118 CUBNO60494 3623 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 IGHV3OR16-10A0A075B7F0 116 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 A0A0U1RQK1 487 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 UBE2L5PA0A1B0GUS4 154 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 TEX22C9J3V5 150 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 FCN1O00602 326 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 ATP6V1G1O75348 118 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 ACTL6BO94805 426 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 TGFAP01135 160 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 RAB5CP51148 216 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 HNF4GQ14541 408 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 MAPK1IP1LQ8NDC0 245 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 SCGB1C1Q8TD33 95 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 SRSF12Q8WXF0 261 aaKnown RBP6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 TAF15Q92804 592 aaKnown RBP eCLIP6.84□□□□□ -1.311e-8■■■□□ 17.5
NUDCD3-209ENST00000487118 SAT2Q96F10 170 aaPredicted RBP6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 CXorf58Q96LI9 332 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 PSMG3Q9BT73 122 aaPredicted RBP6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 C1RLQ9NZP8 487 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 WDR83OSQ9Y284 106 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 TIMM9Q9Y5J7 89 aa6.84□□□□□ -1.31
NUDCD3-209ENST00000487118 CR1P17927 2039 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 UMAD1C9J7I0 102 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 IFNA4P05014 189 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 OR13C7P0DN81 318 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 SNCAP37840 140 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 SUB1P53999 127 aaKnown RBP eCLIP6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 RUNX1Q01196 453 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 PLGLAQ15195 96 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 AANATQ16613 207 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 TUSC1Q2TAM9 212 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 CYB5R2Q6BCY4 276 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 SLC25A24Q6NUK1 477 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 ZNF562Q6V9R5 426 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 Q8N9W7 124 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 WFDC11Q8NEX6 87 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 OR2G3Q8NGZ4 309 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 PIFOQ8TCI5 191 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 RNASEH2CQ8TDP1 164 aaKnown RBP6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 P2RX4Q99571 388 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 RFNGQ9Y644 331 aa6.83□□□□□ -1.32
NUDCD3-209ENST00000487118 ZNF705EA8MWA4 302 aaPredicted RBP6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 TRIM77I1YAP6 450 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 MPDU1O75352 247 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 HLA-DRB1P01911 266 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 FBP1P09467 338 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 AREGP15514 252 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 FGF7P21781 194 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 GPX4P36969 197 aaPredicted RBP6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 GNB1P62873 340 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 BLOC1S1P78537 153 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 SERF2P84101 59 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 CD69Q07108 199 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 ARSJQ5FYB0 599 aaPredicted RBP6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 TMEM182Q6ZP80 229 aaPredicted RBP6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 C9orf139Q6ZV77 190 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 CACNG8Q8WXS5 425 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 RSG1Q9BU20 258 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 PARP11Q9NR21 331 aa6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 LSM4Q9Y4Z0 139 aaKnown RBP6.82□□□□□ -1.32
NUDCD3-209ENST00000487118 FLNAP21333 2647 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms