RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 WSB1Q9Y6I7 421 aa12.38□□□□□ -0.43
APOE-205ENST00000485628 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 A0A1B0GUS0 222 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 DEDDO75618 318 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 NXPH3O95157 252 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 RNASE2P10153 161 aaKnown RBP12.37□□□□□ -0.43
APOE-205ENST00000485628 PSMB8P28062 276 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 KIAA0141Q14154 515 aaPredicted RBP12.37□□□□□ -0.43
APOE-205ENST00000485628 Q5BKY6 102 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 C10orf99Q6UWK7 81 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 RAB40CQ96S21 281 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 GON7Q9BXV9 100 aa12.37□□□□□ -0.43
APOE-205ENST00000485628 F11RQ9Y624 299 aaKnown RBP12.37□□□□□ -0.43
APOE-205ENST00000485628 CEBPZOSA8MTT3 80 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 H3BUA1 57 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 MPC2O95563 127 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 APELAP0DMC3 54 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 MDKP21741 143 aaPredicted RBP12.36□□□□□ -0.43
APOE-205ENST00000485628 ATP5IP56385 69 aaPredicted RBP12.36□□□□□ -0.43
APOE-205ENST00000485628 C2orf83Q53S99 150 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 OR1P1Q8NH06 330 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 CIB3Q96Q77 187 aaPredicted RBP12.36□□□□□ -0.43
APOE-205ENST00000485628 HINT2Q9BX68 163 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 ZFP57Q9NU63 452 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 U3KQ87 197 aa12.36□□□□□ -0.43
APOE-205ENST00000485628 IGLV11-55A0A075B6I3 123 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 C15orf62A8K5M9 175 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 HTR2BP41595 481 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 ERHP84090 104 aaKnown RBP12.35□□□□□ -0.43
APOE-205ENST00000485628 ECSCRQ19T08 205 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 TCTEX1D4Q5JR98 221 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 C19orf35Q6ZS72 473 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 MRPL41Q8IXM3 137 aaKnown RBP12.35□□□□□ -0.43
APOE-205ENST00000485628 OR5T1Q8NG75 326 aa12.35□□□□□ -0.43
APOE-205ENST00000485628 hCG_2014768A0A024R1R8 64 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 PRSS46E5RG02 174 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 TSC22D2O75157 780 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 REG1AP05451 166 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 ELANEP08246 267 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 HOXA1P49639 335 aaPredicted RBP12.34□□□□□ -0.43
APOE-205ENST00000485628 KRTAP10-3P60369 221 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 FOXL1Q12952 345 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 FOXE3Q13461 319 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 PRSS54Q6PEW0 395 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 TMEM14EPQ6UXP3 125 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 ZNF329Q86UD4 541 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 COMMD1Q8N668 190 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 KLHDC1Q8N7A1 406 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 ABHD5Q8WTS1 349 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 NEURL2Q9BR09 285 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 KLK15Q9H2R5 256 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 HIPK2Q9H2X6 1198 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 RANGRFQ9HD47 186 aaPredicted RBP12.34□□□□□ -0.43
APOE-205ENST00000485628 HEYLQ9NQ87 328 aaPredicted RBP12.34□□□□□ -0.43
APOE-205ENST00000485628 OR5AC2Q9NZP5 309 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 RNF114Q9Y508 228 aa12.34□□□□□ -0.43
APOE-205ENST00000485628 PSMB11A5LHX3 300 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 WRBO00258 174 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 SSSCA1O60232 199 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 IAPPP10997 89 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 SLC25A4P12235 298 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 CD83Q01151 205 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 TEX38Q6PEX7 206 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 TCTE3Q8IZS6 198 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 SLC24A4Q8NFF2 622 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 OR1L6Q8NGR2 347 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 OR4C12Q96R67 309 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 ENY2Q9NPA8 101 aa12.33□□□□□ -0.44
APOE-205ENST00000485628 LYRM2Q9NU23 88 aaPredicted RBP12.33□□□□□ -0.44
APOE-205ENST00000485628 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
APOE-205ENST00000485628 PRH1P02810 166 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 RAB9AP51151 201 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 FGL1Q08830 312 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 CENPVQ7Z7K6 275 aaPredicted RBP12.32□□□□□ -0.44
APOE-205ENST00000485628 OR5AU1Q8NGC0 362 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 OR2T35Q8NGX2 323 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 WFDC12Q8WWY7 111 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 SLA2Q9H6Q3 261 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 PSENENQ9NZ42 101 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 TENM1Q9UKZ4 2725 aa12.32□□□□□ -0.44
APOE-205ENST00000485628 E5RGE8 158 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 I3L2K1 104 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 HIST1H1BP16401 226 aaKnown RBP12.31□□□□□ -0.44
APOE-205ENST00000485628 NPY1RP25929 384 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 SNCAP37840 140 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 P2RY1P47900 373 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 S100A10P60903 97 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 SLC35B1P78383 322 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 LRRC37A5PQ49AS3 106 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 AWAT1Q58HT5 328 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 HAPLN4Q86UW8 402 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 C19orf24Q9BVV8 132 aa12.31□□□□□ -0.44
APOE-205ENST00000485628 FNDC4Q9H6D8 234 aaPredicted RBP12.31□□□□□ -0.44
APOE-205ENST00000485628 K7EIM0 57 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 CCNKO75909 580 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 RLN2P04090 185 aa12.3□□□□□ -0.44
APOE-205ENST00000485628 SUB1P53999 127 aaKnown RBP eCLIP12.3□□□□□ -0.44
APOE-205ENST00000485628 CD300CQ08708 224 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms