RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 RNF167Q9H6Y7 350 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 CACFD1Q9UGQ2 172 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 PRNDQ9UKY0 176 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 UFC1Q9Y3C8 167 aa4.69□□□□□ -1.66
PTCD3-215ENST00000484203 TRAV25A0A0B4J276 109 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 PIGBOS1A0A0B4J2F0 54 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 PRSS29PA6NIE9 313 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 BMPR1BO00238 502 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 PGLYRP1O75594 196 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 SERPINE2P07093 398 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 CSN3P07498 182 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 APELAP0DMC3 54 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 IGHV4-30-4P0DP06 118 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF182P17025 639 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 HRH1P35367 487 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 ARL3P36405 182 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 RFX2P48378 723 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 ELLP55199 621 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 BRWD1-AS2P59051 145 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 LSM3P62310 102 aaKnown RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 MRPS10P82664 201 aaKnown RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 SSBP1Q04837 148 aaKnown RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 IL34Q6ZMJ4 242 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF818PQ6ZRF7 136 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 SSX9Q7RTT3 188 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 ARRDC1Q8N5I2 433 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 GDPD1Q8N9F7 314 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 GPX8Q8TED1 209 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 LSM10Q969L4 123 aaKnown RBP4.68□□□□□ -1.66
PTCD3-215ENST00000484203 RCHY1Q96PM5 261 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 COMMD3Q9UBI1 195 aa4.68□□□□□ -1.66
PTCD3-215ENST00000484203 IGLV11-55A0A075B6I3 123 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 TRGV11A0A075B6L2 103 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 IGLC7A0M8Q6 106 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF320A2RRD8 509 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 HMX3A6NHT5 357 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 C2orf70A6NJV1 201 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 A8MWP6 167 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 FAM25AB3EWG3 89 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 FAM25CB3EWG5 89 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 FAM25GB3EWG6 89 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 SCGB2A1O75556 95 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 S1PR2O95136 353 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 GABARAPO95166 117 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 OR2C1O95371 312 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 TRBV12-3P01733 135 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 PMP2P02689 132 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 PRH1P02810 166 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 RLN1P04808 185 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 CLEC3BP05452 202 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 CD5P06127 495 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 OR13C7P0DN81 318 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 FOLR2P14207 255 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 AREGP15514 252 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 HLA-DMAP28067 261 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 BMI1P35226 326 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 VBP1P61758 197 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF45Q02386 682 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 CD300EQ496F6 205 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-215ENST00000484203 RNASE10Q5GAN6 216 aaKnown RBP4.67□□□□□ -1.66
PTCD3-215ENST00000484203 C10orf55Q5SWW7 151 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ZNF57Q68EA5 555 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-215ENST00000484203 PLET1Q6UQ28 207 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 SBSPONQ8IVN8 264 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 OR1P1Q8NH06 330 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 MUC7Q8TAX7 377 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ZFAND1Q8TCF1 268 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 FCAMRQ8WWV6 532 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ISOC1Q96CN7 298 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 BSCL2Q96G97 398 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ASCL2Q99929 193 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 BCL7BQ9BQE9 202 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 TM2D3Q9BRN9 247 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 ZC4H2Q9NQZ6 224 aa4.67□□□□□ -1.66
PTCD3-215ENST00000484203 MRPL27Q9P0M9 148 aaKnown RBP4.67□□□□□ -1.66
PTCD3-215ENST00000484203 DNAH9Q9NYC9 4486 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 MEIS3P1A6NDR6 274 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 NOL3O60936 208 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 RBMXL2O75526 392 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 NDUFB8O95169 186 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 KRASP01116 189 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 EIF4EP06730 217 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 FCER2P06734 321 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 LYL1P12980 280 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 CBLN1P23435 193 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 LPAR6P43657 344 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 CMC4P56277 68 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 RND3P61587 244 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 NCS1P62166 190 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 BLOC1S1P78537 153 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 ERHP84090 104 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 RELQ04864 619 aaPredicted RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 MEF2DQ14814 521 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 DEFB114Q30KQ6 69 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 GPR107Q5VW38 600 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 LAMTOR1Q6IAA8 161 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 CLEC19AQ6UXS0 136 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 RBPMS2Q6ZRY4 209 aaKnown RBP4.66□□□□□ -1.66
PTCD3-215ENST00000484203 H2BFWTQ7Z2G1 175 aa4.66□□□□□ -1.66
PTCD3-215ENST00000484203 GPR141Q7Z602 305 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms