RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 FRMD6-AS1P0C7T7 363 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
VAMP4-204ENST00000482519 FOLR2P14207 255 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 EDN2P20800 178 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 MFAP2P55001 183 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 SPINK9Q5DT21 86 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 PLET1Q6UQ28 207 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 ADAMTSL5Q6ZMM2 481 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 Q8N402 240 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 OR51S1Q8NGJ8 323 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 VN1R17PQ8TDU5 208 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 PRRT1Q99946 306 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 NXF2Q9GZY0 626 aaKnown RBP12.57□□□□□ -0.4
VAMP4-204ENST00000482519 SIGLEC8Q9NYZ4 499 aa12.57□□□□□ -0.4
VAMP4-204ENST00000482519 OR2T8A6NH00 312 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 LGALS9O00182 355 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 HSPE1P61604 102 aaKnown RBP12.56□□□□□ -0.4
VAMP4-204ENST00000482519 CD300EQ496F6 205 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-204ENST00000482519 PYDC2Q56P42 97 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 UBAC2Q8NBM4 344 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 CACNG8Q8WXS5 425 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 MISP3Q96FF7 219 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 RTBDNQ9BSG5 229 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-204ENST00000482519 THAP7Q9BT49 309 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-204ENST00000482519 PLEKHA3Q9HB20 300 aa12.56□□□□□ -0.4
VAMP4-204ENST00000482519 ANKRD20A5PA0PJZ0 165 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 IFNA17P01571 189 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 OR5AC1P0C628 307 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 CBLN1P23435 193 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 S100A5P33763 92 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 PRCDQ00LT1 54 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 GTSCR1Q86UQ5 136 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 SBSPONQ8IVN8 264 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 SGPP2Q8IWX5 399 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 Q8N1Y9 231 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 OR1L6Q8NGR2 347 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 SCARB1Q8WTV0 552 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 RRNAD1Q96FB5 475 aaKnown RBP12.55□□□□□ -0.4
VAMP4-204ENST00000482519 SOSTQ9BQB4 213 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 C5orf66Q9H5L9 145 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 NAA60Q9H7X0 242 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 C21orf62Q9NYP8 219 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 U3KQK5 164 aa12.55□□□□□ -0.4
VAMP4-204ENST00000482519 A0A0B4J293 547 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 IGHV4-30-4P0DP06 118 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 UCP1P25874 307 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 ERHP84090 104 aaKnown RBP12.54□□□□□ -0.4
VAMP4-204ENST00000482519 SURF2Q15527 256 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-204ENST00000482519 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 DEFB114Q30KQ6 69 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 TM4SF20Q53R12 229 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 Q56UQ5 140 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 UNQ9165/PRO28630Q6UXU0 137 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 OR2C3Q8N628 320 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 SLC35G3Q8N808 338 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 OR1P1Q8NH06 330 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 PDCD10Q9BUL8 212 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 SCP2D1Q9UJQ7 156 aa12.54□□□□□ -0.4
VAMP4-204ENST00000482519 TMEM213A2RRL7 107 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 TGOLN2O43493 480 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 UXS1Q8NBZ7 420 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 OR2K2Q8NGT1 345 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 PINX1Q96BK5 328 aaKnown RBP12.53□□□□□ -0.4
VAMP4-204ENST00000482519 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 RBM38Q9H0Z9 239 aaKnown RBP12.53□□□□□ -0.4
VAMP4-204ENST00000482519 GPR132Q9UNW8 380 aa12.53□□□□□ -0.4
VAMP4-204ENST00000482519 K7EIM0 57 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 IGHV3-48P01763 117 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 P0C879 139 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 SNCAP37840 140 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 ETV6P41212 452 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 BSCL2Q96G97 398 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-204ENST00000482519 TUBA4BQ9H853 241 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 PALMDQ9NP74 551 aa12.52□□□□□ -0.41
VAMP4-204ENST00000482519 TECRQ9NZ01 308 aaKnown RBP12.52□□□□□ -0.41
VAMP4-204ENST00000482519 IGHV3OR16-8A0A075B7F1 116 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 A0A0G2JRQ6 117 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 CRYM-AS1A6NIL9 109 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 A8MWP6 167 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 CDS2O95674 445 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 AKR1C4P17516 323 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 HOXA1P49639 335 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-204ENST00000482519 CD81P60033 236 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 DHODHQ02127 395 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 ZNF57Q68EA5 555 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-204ENST00000482519 SPSB3Q6PJ21 355 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
VAMP4-204ENST00000482519 TOMM5Q8N4H5 51 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 GLYATL2Q8WU03 294 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 WDR89Q96FK6 387 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-204ENST00000482519 SCGB3A2Q96PL1 93 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 CHRDL1Q9BU40 450 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 C20orf24Q9BUV8 137 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 ENY2Q9NPA8 101 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 SLC2A8Q9NY64 477 aa12.51□□□□□ -0.41
VAMP4-204ENST00000482519 MLXQ9UH92 298 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms