RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 FGF8P55075 233 aaPredicted RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 PNRC1Q12796 327 aaPredicted RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 FAM122CQ6P4D5 195 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 KIR3DL3Q8N743 410 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 RPEQ96AT9 228 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 PXMP4Q9Y6I8 212 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 CELSR2Q9HCU4 2923 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 LOC105371242A0A075B767 164 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 IGHV1-3A0A0C4DH29 117 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 C22orf46C9J442 243 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 RNASE2P10153 161 aaKnown RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 GPX4P36969 197 aaPredicted RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 MEF2BQ02080 365 aaPredicted RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 MMD2Q8IY49 270 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 OR11H6Q8NGC7 330 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 OR4P4Q8NGL7 312 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
RXRA-202ENST00000481739 PERPQ96FX8 193 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 ONECUT1Q9UBC0 465 aa12.72□□□□□ -0.37
RXRA-202ENST00000481739 B4DEV8 164 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 H3BQ15 152 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 SNRNP70P08621 437 aaKnown RBP12.71□□□□□ -0.38
RXRA-202ENST00000481739 CEACAM3P40198 252 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 B2MP61769 119 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 TVP23CQ96ET8 276 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 TXNDC17Q9BRA2 123 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 BPESC1Q9GZL8 116 aa12.71□□□□□ -0.38
RXRA-202ENST00000481739 ZNF430Q9H8G1 570 aaPredicted RBP12.71□□□□□ -0.38
RXRA-202ENST00000481739 A0A087WWC5 75 aa12.7□□□□□ -0.38
RXRA-202ENST00000481739 MYOD1P15172 320 aa12.7□□□□□ -0.38
RXRA-202ENST00000481739 HNF4GQ14541 408 aa12.7□□□□□ -0.38
RXRA-202ENST00000481739 NANPQ8TBE9 248 aa12.7□□□□□ -0.38
RXRA-202ENST00000481739 FAM168AQ92567 244 aa12.7□□□□□ -0.38
RXRA-202ENST00000481739 PSMG3-AS1Q96PY0 264 aa12.7□□□□□ -0.38
RXRA-202ENST00000481739 PUS1Q9Y606 427 aaKnown RBP eCLIP12.7□□□□□ -0.38
RXRA-202ENST00000481739 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
RXRA-202ENST00000481739 LY6LH3BQJ8 138 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 SLC25A17O43808 307 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 TSPAN9O75954 239 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 YIF1AO95070 293 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 PRTN3P24158 256 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 CD69Q07108 199 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 FAM90A2PQ658T7 463 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 CLEC2AQ6UVW9 174 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 PIMREGQ9BSJ6 248 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 C19orf24Q9BVV8 132 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 LOC105371267A0A1B0GV96 52 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
RXRA-202ENST00000481739 ACTL6BO94805 426 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 OPN1MWP04001 364 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 OPN1MW2P0DN77 364 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 OPN1MW3P0DN78 364 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 COX7A1P24310 79 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 HTR1DP28221 377 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 KRTAP10-9P60411 292 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 PRELID1Q9Y255 219 aa12.69□□□□□ -0.38
RXRA-202ENST00000481739 MT-CO2P00403 227 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 RHOBP62745 196 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PRR20EP86478 221 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PRR20CP86479 221 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PRR20DP86480 221 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PRR20BP86481 221 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PRR20AP86496 221 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PRSS8Q16651 343 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 HIST2H2BCQ6DN03 193 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 MOB3BQ86TA1 216 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 PNKDQ8N490 385 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 STPG3Q8N7X2 389 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 ZNF114Q8NC26 417 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 C1orf159Q96HA4 380 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 DPM3Q9P2X0 92 aa12.68□□□□□ -0.38
RXRA-202ENST00000481739 CXorf1O96002 111 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 CRYGBP07316 175 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 COMPP49747 757 aaPredicted RBP12.67□□□□□ -0.38
RXRA-202ENST00000481739 CEBPGP53567 150 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 AKIRIN2Q53H80 203 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 TPTE2P1Q5T6R2 138 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 SRSF8Q9BRL6 282 aaKnown RBP12.67□□□□□ -0.38
RXRA-202ENST00000481739 SIRT7Q9NRC8 400 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 ANKRD17O75179 2603 aaKnown RBP12.67□□□□□ -0.38
RXRA-202ENST00000481739 CXorf65A6NEN9 183 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 OOSP1A8MZH6 123 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 MT-ND4LP03901 98 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 FOLR2P14207 255 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 CD81P60033 236 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 PSG5Q15238 335 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 ETFRF1Q6IPR1 90 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 SLC16A13Q7RTY0 426 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 OR10W1Q8NGF6 305 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 C20orf24Q9BUV8 137 aa12.67□□□□□ -0.38
RXRA-202ENST00000481739 SLC45A2Q9UMX9 530 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms