RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 SERPINE2P07093 398 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 FGF7P21781 194 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 ERVK-16P61578 105 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 SRPXP78539 464 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 TMEM267Q0VDI3 215 aaPredicted RBP6.56□□□□□ -1.36
USP54-212ENST00000480210 PLGLAQ15195 96 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 KRTAP24-1Q3LI83 254 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 PHLDA2Q53GA4 152 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 TMEM128Q5BJH2 165 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 ARSJQ5FYB0 599 aaPredicted RBP6.56□□□□□ -1.36
USP54-212ENST00000480210 FAM74A1Q5RGS3 127 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 FAAP20Q6NZ36 180 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 TMEM88Q6PEY1 159 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 ZNF562Q6V9R5 426 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 PPP1R27Q86WC6 154 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 MMD2Q8IY49 270 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.56□□□□□ -1.36
USP54-212ENST00000480210 OR1S2Q8NGQ3 325 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 OR51H1Q8NH63 302 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 HIST1H2BAQ96A08 127 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 GALNT14Q96FL9 552 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 C14orf144Q96I85 54 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 RTBDNQ9BSG5 229 aaPredicted RBP6.56□□□□□ -1.36
USP54-212ENST00000480210 C19orf24Q9BVV8 132 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 NMES1Q9C002 83 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 C5orf66Q9H5L9 145 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 BET1LQ9NYM9 111 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 SHPKQ9UHJ6 478 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 SIGLEC9Q9Y336 463 aa6.56□□□□□ -1.36
USP54-212ENST00000480210 A0A087WWC5 75 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 CRYM-AS1A6NIL9 109 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 B4DEV8 164 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 PPP1R2P9O14990 202 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 ACTL6BO94805 426 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 IGLV2-23P01705 113 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 MBP02144 154 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 AMY1AP04745 511 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 IGF1P05019 195 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 CD5P06127 495 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 CRYGBP07316 175 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 UCP1P25874 307 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 LPAR6P43657 344 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 VDAC2P45880 294 aaPredicted RBP6.55□□□□□ -1.36
USP54-212ENST00000480210 BRWD1-AS2P59051 145 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 BLCAPP62952 87 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 SLC35B1P78383 322 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 SAPCD1Q5SSQ6 148 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 SLC35E3Q7Z769 313 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 FAM219AQ8IW50 185 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 LINC01006Q8NI28 216 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 TMEM167AQ8TBQ9 72 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 C2CD4CQ8TF44 421 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 IL22RA2Q969J5 263 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 MRGPRFQ96AM1 343 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 RHOVQ96L33 236 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 NAA60Q9H7X0 242 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 ZNF702PQ9H963 129 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 FKBP11Q9NYL4 201 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 RNF114Q9Y508 228 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 CUBNO60494 3623 aa6.55□□□□□ -1.36
USP54-212ENST00000480210 DUXBA0A1W2PPF3 345 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 SLC25A17O43808 307 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 JTBO76095 146 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 KBTBD11O94819 623 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 CDS2O95674 445 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 GCGP01275 180 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 IL6RP08887 468 aaPredicted RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 OR4E1P0C645 316 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 PSMB6P28072 239 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 PPT1P50897 306 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 CRIP2P52943 208 aaPredicted RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 H2BFSP57053 126 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 LINC00205P59089 165 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 NUTF2P61970 127 aaKnown RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 RELBQ01201 579 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 ZNF585BQ52M93 769 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 AWAT1Q58HT5 328 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 C9orf152Q5JTZ5 239 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 C12orf54Q6X4T0 127 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 SLC25A42Q86VD7 318 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 RNASEH2CQ8TDP1 164 aaKnown RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 WDR89Q96FK6 387 aaPredicted RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 BTF3L4Q96K17 158 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 RITA1Q96K30 269 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 TMEM222Q9H0R3 208 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 FBXL15Q9H469 300 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 VSIG4Q9Y279 399 aa6.54□□□□□ -1.36
USP54-212ENST00000480210 STRAPQ9Y3F4 350 aaKnown RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 TET2Q6N021 2002 aaPredicted RBP6.54□□□□□ -1.36
USP54-212ENST00000480210 IGHV7-81A0A0B4J1V7 117 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 MARCH11A6NNE9 402 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 ZNF705EA8MWA4 302 aaPredicted RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 UPK2O00526 184 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 RAMP3O60896 148 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 NDUFS6O75380 124 aaKnown RBP6.53□□□□□ -1.36
USP54-212ENST00000480210 CNIH1O95406 144 aa6.53□□□□□ -1.36
USP54-212ENST00000480210 OR5AC1P0C628 307 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms