RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SYNGR2O43760 224 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 FBXO24O75426 580 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 PRH1P02810 166 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 PSMB8P28062 276 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 RAB9AP51151 201 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 SUB1P53999 127 aaKnown RBP eCLIP8.75□□□□□ -1.01
CLDN11-205ENST00000480067 CYCSP99999 105 aaKnown RBP8.75□□□□□ -1.01
CLDN11-205ENST00000480067 ID3Q02535 119 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 OR2C3Q8N628 320 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 DTD1Q8TEA8 209 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 WIPF2Q8TF74 440 aaPredicted RBP8.75□□□□□ -1.01
CLDN11-205ENST00000480067 WFDC12Q8WWY7 111 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 MDFIQ99750 246 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 SLA2Q9H6Q3 261 aa8.75□□□□□ -1.01
CLDN11-205ENST00000480067 TCRBV4S1A1TA0A5B7 111 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 TRGV3P03979 118 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 CD28P10747 220 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 HTR2BP41595 481 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 H2BFSP57053 126 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 RRAS2P62070 204 aaPredicted RBP8.74□□□□□ -1.01
CLDN11-205ENST00000480067 FCN2Q15485 313 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 OR1L6Q8NGR2 347 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 CIB3Q96Q77 187 aaPredicted RBP8.74□□□□□ -1.01
CLDN11-205ENST00000480067 P2RX4Q99571 388 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 KLK15Q9H2R5 256 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 F11RQ9Y624 299 aaKnown RBP8.74□□□□□ -1.01
CLDN11-205ENST00000480067 STAB1Q9NY15 2570 aa8.74□□□□□ -1.01
CLDN11-205ENST00000480067 BRI3O95415 125 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 LY86O95711 162 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 MBPP02686 304 aaPredicted RBP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 RPLP1P05386 114 aaKnown RBP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 HIST1H1BP16401 226 aaKnown RBP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 CXCL3P19876 107 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 TPPP2P59282 170 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 POLR2GP62487 172 aaKnown RBP eCLIP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 SRSF4Q08170 494 aaKnown RBP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 TCTEX1D4Q5JR98 221 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 KHDC1LQ5JSQ8 128 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 SLC25A24Q6NUK1 477 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 Q6ZNX1 250 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 C19orf35Q6ZS72 473 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 LCNL1Q6ZST4 164 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 RNF152Q8N8N0 203 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 OR1P1Q8NH06 330 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 NMES1Q9C002 83 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 ZFP57Q9NU63 452 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 THYN1Q9P016 225 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 U3KQ87 197 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 A0A0G2JLM5 398 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 SSSCA1O60232 199 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 IFNA10P01566 189 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 IAPPP10997 89 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 KRTAP10-3P60369 221 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 RPP30P78346 268 aaKnown RBP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 RHOGP84095 191 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 CD83Q01151 205 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 KRTAP21-3Q3LHN1 58 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 NOXA1Q86UR1 476 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 NECAP1Q8NC96 275 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 SLC24A4Q8NFF2 622 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 OR11H7Q8NGC8 314 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 CITED2Q99967 270 aaPredicted RBP8.73□□□□□ -1.01
CLDN11-205ENST00000480067 ZNF747Q9BV97 191 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 FBXL7Q9UJT9 491 aa8.73□□□□□ -1.01
CLDN11-205ENST00000480067 IGLV11-55A0A075B6I3 123 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 TRBV9A0A0B4J1U6 114 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 OR2J3O76001 311 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 RLN2P04090 185 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 ATP5IP56385 69 aaPredicted RBP8.72□□□□□ -1.01
CLDN11-205ENST00000480067 S100A10P60903 97 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 IL15RAQ13261 267 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 MISP3Q96FF7 219 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 USMG5Q96IX5 58 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 FANCD2OSQ96PS1 177 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 RAB40CQ96S21 281 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 CITED1Q99966 193 aa8.72□□□□□ -1.01
CLDN11-205ENST00000480067 ZNF436Q9C0F3 470 aaPredicted RBP8.72□□□□□ -1.01
CLDN11-205ENST00000480067 LSM5Q9Y4Y9 91 aaKnown RBP8.72□□□□□ -1.01
CLDN11-205ENST00000480067 TSSC4Q9Y5U2 329 aaPredicted RBP8.72□□□□□ -1.01
CLDN11-205ENST00000480067 FAM223BA6NKX1 122 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 K7EPK0 472 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 L7N2F9 121 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 RNASE2P10153 161 aaKnown RBP8.71□□□□□ -1.02
CLDN11-205ENST00000480067 PVALBP20472 110 aaPredicted RBP8.71□□□□□ -1.02
CLDN11-205ENST00000480067 NPY1RP25929 384 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 CDX1P47902 265 aaPredicted RBP8.71□□□□□ -1.02
CLDN11-205ENST00000480067 MFAP2P55001 183 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 VAMP2P63027 116 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 ATP5G2Q06055 141 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 RAB32Q13637 225 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 C15orf32Q32M92 178 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 BSXQ3C1V8 233 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 LRRC37A5PQ49AS3 106 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 SPANXN5Q5MJ07 72 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 HIST2H2BDQ6DRA6 164 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 SHISA2Q6UWI4 295 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 FAM223AQ8IWN6 122 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 PPP1R1CQ8WVI7 109 aa8.71□□□□□ -1.02
CLDN11-205ENST00000480067 SMIM8Q96KF7 97 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms