RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	CYB5B	O43169	146 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	SLC25A6	P12236	298 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	RPL27A	P46776	148 aa	Known RBP	11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	CRIP2	P52943	208 aa	Predicted RBP	11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	AKIRIN2	Q53H80	203 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR1L8	Q8NGR8	309 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	ZNF431	Q8TF32	576 aa	Predicted RBP	11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	MITD1	Q8WV92	249 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	PARP11	Q9NR21	331 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	COA4	Q9NYJ1	87 aa		11.98	□□□□□ -0.49
HDLBP-238	ENST00000479894	TRAV41	A0A0B4J266	112 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894		A0A1B0GU03	582 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	FCN1	O00602	326 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	IGHG4	P01861	327 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	IGHV4-30-4	P0DP06	118 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	RUNX1	Q01196	453 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	ZNF616	Q08AN1	781 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	LINC00476	Q8WZB0	136 aa		11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	FOXA2	Q9Y261	457 aa	Predicted RBP	11.97	□□□□□ -0.49
HDLBP-238	ENST00000479894	LINC01548	A6NM66	108 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	C15orf61	A6NNL5	157 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	OVOL1	O14753	267 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	IGKV1-39	P01597	117 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	IGKV1D-39	P04432	117 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	TRAPPC2	P0DI81	140 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	TRAPPC2B	P0DI82	140 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	SULT1A3	P0DMM9	295 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	SULT1A4	P0DMN0	295 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	CFHR3	Q02985	330 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	ASPHD1	Q5U4P2	390 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	SLC35G3	Q8N808	338 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR1N2	Q8NGR9	330 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	GRPEL2	Q8TAA5	225 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	MYOZ3	Q8TDC0	251 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	SRSF12	Q8WXF0	261 aa	Known RBP	11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	HSPB9	Q9BQS6	159 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	QTRT1	Q9BXR0	403 aa	Known RBP	11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894	OR51B2	Q9Y5P1	312 aa		11.96	□□□□□ -0.49
HDLBP-238	ENST00000479894		A0A1W2PN81	502 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	MSGN1	A6NI15	193 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894		H3BUA1	57 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	ATP6V0E1	O15342	81 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	SAP30	O75446	220 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	IGKV1-5	P01602	117 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	PSMB8	P28062	276 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	CHRNA7	P36544	502 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	HSPE1	P61604	102 aa	Known RBP	11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	PJVK	Q0ZLH3	352 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	SMCO1	Q147U7	214 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	UNQ5815/PRO19632	Q6UWF5	114 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	OR1L6	Q8NGR2	347 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	OR52E5	Q8NH55	327 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	UBE2E2	Q96LR5	201 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	ENY2	Q9NPA8	101 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	TPSG1	Q9NRR2	321 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	TMEM14B	Q9NUH8	114 aa		11.95	□□□□□ -0.5
HDLBP-238	ENST00000479894	HECTD4	Q9Y4D8	3996 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894		I3L521	148 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	IFNA17	P01571	189 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894		P0C879	139 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	SPCS3	P61009	180 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	ANKRD55	Q3KP44	614 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	TMEM65	Q6PI78	240 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	LYZL2	Q7Z4W2	148 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894		Q8N1Y9	231 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	LHFPL5	Q8TAF8	219 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	DCUN1D4	Q92564	292 aa		11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	FYTTD1	Q96QD9	318 aa	Known RBP	11.94	□□□□□ -0.5
HDLBP-238	ENST00000479894	FAM90A26	D6RGX4	464 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	MED6	O75586	246 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	BRI3	O95415	125 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	OR2B8P	P59922	312 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	ERH	P84090	104 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	AARD	Q4LEZ3	155 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	NMS	Q5H8A3	153 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	LFNG	Q8NES3	379 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	OR1S1	Q8NH92	325 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	GPR146	Q96CH1	333 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	SLA2	Q9H6Q3	261 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	CACNG5	Q9UF02	275 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894	KMT2A	Q03164	3969 aa		11.93	□□□□□ -0.5
HDLBP-238	ENST00000479894		A0A0B4J293	547 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	TEX50	A0A1B0GTY4	177 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	HOXB5	P09067	269 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	OR9G9	P0C7N8	305 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	HIST1H1B	P16401	226 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	SUB1	P53999	127 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	PRCD	Q00LT1	54 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	ECSCR	Q19T08	205 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	MRGPRG-AS1	Q2M3A8	158 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	ACSM6	Q6P461	480 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	NOXA1	Q86UR1	476 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	TTC9C	Q8N5M4	171 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	UXS1	Q8NBZ7	420 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	HINT2	Q9BX68	163 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	PLEKHA3	Q9HB20	300 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	NDUFA4L2	Q9NRX3	87 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	WSB1	Q9Y6I7	421 aa		11.92	□□□□□ -0.5
HDLBP-238	ENST00000479894	TRAV3	A0A0B4J244	114 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 477.7 ms