RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 PRH1P02810 166 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 OR13C7P0DN81 318 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 SLC25A4P12235 298 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 CHRNA7P36544 502 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 DEFA5Q01523 94 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 ARL16Q0P5N6 197 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 STPG2Q8N412 459 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 TTC9CQ8N5M4 171 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 ZNF114Q8NC26 417 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 FAM110DQ8TAY7 271 aaPredicted RBP10.26□□□□□ -0.77
CHD3-210ENST00000479080 ABHD5Q8WTS1 349 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 SMIM8Q96KF7 97 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 FANCD2OSQ96PS1 177 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 SRSF8Q9BRL6 282 aaKnown RBP10.26□□□□□ -0.77
CHD3-210ENST00000479080 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 KLK9Q9UKQ9 250 aa10.26□□□□□ -0.77
CHD3-210ENST00000479080 NF1P21359 2839 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 TRAV41A0A0B4J266 112 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 NDUFA7O95182 113 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 RPL15P61313 204 aaKnown RBP10.25□□□□□ -0.77
CHD3-210ENST00000479080 UNQ5815/PRO19632Q6UWF5 114 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 TMEM14EPQ6UXP3 125 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 OR5T1Q8NG75 326 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 RAB40CQ96S21 281 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 C16orf95Q9H693 158 aa10.25□□□□□ -0.77
CHD3-210ENST00000479080 HEYLQ9NQ87 328 aaPredicted RBP10.25□□□□□ -0.77
CHD3-210ENST00000479080 F11RQ9Y624 299 aaKnown RBP10.25□□□□□ -0.77
CHD3-210ENST00000479080 BOLA2-SMG1P6H3BVE0 249 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 AP4M1O00189 453 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 TSC22D2O75157 780 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 MED6O75586 246 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 C1QBP02746 253 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 HKR1P10072 659 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 TAS2R30P59541 319 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 TMEM267Q0VDI3 215 aaPredicted RBP10.24□□□□□ -0.77
CHD3-210ENST00000479080 KRTAP21-3Q3LHN1 58 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 AKIRIN2Q53H80 203 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 C2orf83Q53S99 150 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 TMEM252Q8N6L7 170 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.24□□□□□ -0.77
CHD3-210ENST00000479080 SLC24A4Q8NFF2 622 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 LINC01006Q8NI28 216 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 LYRM2Q9NU23 88 aaPredicted RBP10.24□□□□□ -0.77
CHD3-210ENST00000479080 PSENENQ9NZ42 101 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 TNFSF18Q9UNG2 199 aa10.24□□□□□ -0.77
CHD3-210ENST00000479080 IGLV11-55A0A075B6I3 123 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 FXYD6-FXYD2A0A087WZ82 144 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 E5RGE8 158 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 NPY1RP25929 384 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 P2RY1P47900 373 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 SPANXN5Q5MJ07 72 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 HIST2H2BDQ6DRA6 164 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 LCNL1Q6ZST4 164 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 ZNF329Q86UD4 541 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 DCUN1D4Q92564 292 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 FNDC4Q9H6D8 234 aaPredicted RBP10.23□□□□□ -0.77
CHD3-210ENST00000479080 MRPL36Q9P0J6 103 aaKnown RBP10.23□□□□□ -0.77
CHD3-210ENST00000479080 CACFD1Q9UGQ2 172 aa10.23□□□□□ -0.77
CHD3-210ENST00000479080 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 METTL15P1P0C7V9 234 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 CXCL2P19875 107 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 MDKP21741 143 aaPredicted RBP10.22□□□□□ -0.77
CHD3-210ENST00000479080 HTR2BP41595 481 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 EWSR1Q01844 656 aaKnown RBP eCLIP10.22□□□□□ -0.77
CHD3-210ENST00000479080 KIAA0141Q14154 515 aaPredicted RBP10.22□□□□□ -0.77
CHD3-210ENST00000479080 MLANAQ16655 118 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 TCTEX1D4Q5JR98 221 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 TMEM65Q6PI78 240 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 HSD17B13Q7Z5P4 300 aaPredicted RBP10.22□□□□□ -0.77
CHD3-210ENST00000479080 OR1P1Q8NH06 330 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 CIB3Q96Q77 187 aaPredicted RBP10.22□□□□□ -0.77
CHD3-210ENST00000479080 KLK15Q9H2R5 256 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 ENY2Q9NPA8 101 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 ZFP57Q9NU63 452 aa10.22□□□□□ -0.77
CHD3-210ENST00000479080 NIPBLQ6KC79 2804 aaeCLIP10.21□□□□□ -0.77
CHD3-210ENST00000479080 I3L2K1 104 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 K7EIM0 57 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 L7N2F9 121 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 NDUFB8O95169 186 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 IFNA10P01566 189 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 IGHG4P01861 327 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 CAV2P51636 162 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 NKX2-5P52952 324 aaPredicted RBP10.21□□□□□ -0.77
CHD3-210ENST00000479080 PROK1P58294 105 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 KRTAP10-3P60369 221 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 RPL23AP62750 156 aaKnown RBP10.21□□□□□ -0.77
CHD3-210ENST00000479080 VAMP2P63027 116 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 ERHP84090 104 aaKnown RBP10.21□□□□□ -0.77
CHD3-210ENST00000479080 NHLH2Q02577 135 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 FGL1Q08830 312 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 KRTAP24-1Q3LI83 254 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 LAMTOR1Q6IAA8 161 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 THAP6Q8TBB0 222 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 TMEM68Q96MH6 324 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 AQP10Q96PS8 301 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 HIPK2Q9H2X6 1198 aa10.21□□□□□ -0.77
CHD3-210ENST00000479080 WFDC1Q9HC57 220 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms