RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 PDGFBP01127 241 aaPredicted RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 IGKV1-39P01597 117 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 IGKV1D-39P04432 117 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 SP1P08047 785 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 CCL2P13500 99 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 GPX4P36969 197 aaPredicted RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 OPRK1P41145 380 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 WNT5AP41221 380 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 MAGEA5P43359 124 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 ATP5IP56385 69 aaPredicted RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 TAS2R60P59551 318 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 SPCS3P61009 180 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 RANP62826 216 aaKnown RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 HTD2P86397 168 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 PAX5Q02548 391 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 GAMTQ14353 236 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 RTL8BQ17RB0 113 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 TMEM30BQ3MIR4 351 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 PDLIM3Q53GG5 364 aaPredicted RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 PDZD11Q5EBL8 140 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 ACTL10Q5JWF8 245 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 TIPARPQ7Z3E1 657 aaKnown RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 MDP1Q86V88 176 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 RPP25LQ8N5L8 163 aaKnown RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 TMEM251Q8N6I4 163 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 OR51G1Q8NGK1 321 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 OR4X1Q8NH49 305 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 OR52E5Q8NH55 327 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 OR4A16Q8NH70 328 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 BCL2L2Q92843 193 aaPredicted RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF488Q96MN9 340 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 C2orf88Q9BSF0 95 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 NDUFAF3Q9BU61 184 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 NPCDR1Q9BY65 106 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 FGF23Q9GZV9 251 aaPredicted RBP3.51□□□□□ -1.85
GPNMB-210ENST00000478451 CXXC4Q9H2H0 198 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 ENY2Q9NPA8 101 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 WDR83OSQ9Y284 106 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 TP53TG5Q9Y2B4 290 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 LY96Q9Y6Y9 160 aa3.51□□□□□ -1.85
GPNMB-210ENST00000478451 DSCAML1Q8TD84 2053 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 RTTNQ86VV8 2226 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 TRGV5A0A0B4J1U4 118 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 TRGV8A0A0C4DH27 118 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 A0A0U1RQK1 487 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF320A2RRD8 509 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 PINLYPA6NC86 204 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF705GA8MUZ8 300 aaPredicted RBP3.5□□□□□ -1.85
GPNMB-210ENST00000478451 C12orf77C9JDV5 145 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 FNDC10F2Z333 226 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 PHOX2AO14813 284 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 MLNRO43193 412 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 SMPD2O60906 423 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 RHBDL1O75783 438 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 HPRT1P00492 218 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 KRASP01116 189 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 HBZP02008 142 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 MT-ND6P03923 174 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 P0C879 139 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 PAX1P15863 534 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 RAB4AP20338 218 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 GZMHP20718 246 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 KITLGP21583 273 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 CD1BP29016 333 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 OR10J1P30954 320 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 G6PCP35575 357 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 GABRA2P47869 451 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 OR3A1P47881 315 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 RAB7AP51149 207 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 TPPP2P59282 170 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ERVS71-1P61550 626 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 RHOBP62745 196 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 PAFAH1B2P68402 229 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ARL16Q0P5N6 197 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF816Q0VGE8 651 aaPredicted RBP3.5□□□□□ -1.85
GPNMB-210ENST00000478451 USF2Q15853 346 aaPredicted RBP3.5□□□□□ -1.85
GPNMB-210ENST00000478451 Q3ZCU0 254 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 AARDQ4LEZ3 155 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 KRTCAP3Q53RY4 240 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 DCAF10Q5QP82 559 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 PRAMEF5Q5TYX0 476 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 PRAMEF6Q5VXH4 476 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 SPINK14Q6IE38 97 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 BTNL3Q6UXE8 466 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 C17orf78Q8N4C9 275 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.5□□□□□ -1.85
GPNMB-210ENST00000478451 C14orf144Q96I85 54 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 ADTRPQ96IZ2 230 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 SFXN3Q9BWM7 321 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 VSIRQ9H7M9 311 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 HES4Q9HCC6 221 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 NPVFQ9HCQ7 196 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 JPT1Q9UK76 154 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 RFNGQ9Y644 331 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 DOCK11Q5JSL3 2073 aa3.5□□□□□ -1.85
GPNMB-210ENST00000478451 TET2Q6N021 2002 aaPredicted RBP3.49□□□□□ -1.85
GPNMB-210ENST00000478451 RAI1Q7Z5J4 1906 aaPredicted RBP3.49□□□□□ -1.85
GPNMB-210ENST00000478451 A0A1W2PR80 420 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms