RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 ARL6IP5O75915 188 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 SNX4O95219 450 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 SNAP29O95721 258 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 LY6G6CO95867 125 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 HTR1AP08908 422 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 BAALC-AS2P0C853 105 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 CD40LGP29965 261 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 RANBP1P43487 201 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 EIF2B2P49770 351 aaKnown RBP-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 RPL30P62888 115 aaKnown RBP-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 BEX3Q00994 111 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 FABP5Q01469 135 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 GNA13Q14344 377 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 KISS1Q15726 138 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 RNASE10Q5GAN6 216 aaKnown RBP-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 OR10J3Q5JRS4 329 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 CDKL4Q5MAI5 379 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 FAM74A1Q5RGS3 127 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 PIP5KL1Q5T9C9 394 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 TMEM251Q8N6I4 163 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 CDRT4Q8N9R6 151 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 SPERTQ8NA61 448 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 OR10J5Q8NHC4 309 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 KIAA1143Q96AT1 154 aaPredicted RBP-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 GNPNAT1Q96EK6 184 aaPredicted RBP-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 BBS2Q9BXC9 721 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 TNFSF18Q9UNG2 199 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 FUT9Q9Y231 359 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 COQ4Q9Y3A0 265 aa-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 LRPPRCP42704 1394 aaKnown RBP-0.96□□□□□ -2.56
NCKAP1-204ENST00000477988 HEATR1Q9H583 2144 aaKnown RBP-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 MIA2Q96PC5 1412 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 RIMS2Q9UQ26 1411 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 SYNJ2BP-COX16A0A087WUM0 186 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 CCDC169A6NNP5 214 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 LST1O00453 97 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 KDELR3O43731 214 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 FGF6P10767 208 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 COX6A1P12074 109 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 MIPP30301 263 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 PEX19P40855 299 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 CSN1S1P47710 185 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 RPS24P62847 133 aaKnown RBP-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 EXOC3L4Q17RC7 722 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 TNFAIP8L3Q5GJ75 292 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 AADACL4Q5VUY2 407 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 ARL6IP6Q8N6S5 226 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 C4orf3Q8WVX3 66 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 LRRC45Q96CN5 670 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 TMEM147Q9BVK8 224 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 SLC22A4Q9H015 551 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 RGCCQ9H4X1 137 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 RSL24D1Q9UHA3 163 aaKnown RBP-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 HS3ST2Q9Y278 367 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 HDGFL3Q9Y3E1 203 aa-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.97□□□□□ -2.56
NCKAP1-204ENST00000477988 A0A1W2PP64 1363 aa-0.97□□□□□ -2.57
NCKAP1-204ENST00000477988 KIF27Q86VH2 1401 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 SPTBP11277 2137 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 LAMC3Q9Y6N6 1575 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 A0A1W2PPV4 95 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 GSTTP1A0A1W2PQM5 241 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 GOLGA8IPA6NC78 632 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 I3L521 148 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 ACOX3O15254 700 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 YEATS4O95619 227 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 ASS1P00966 412 aaKnown RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 PRM1P04553 51 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 CD2P06729 351 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 LIMS3P0CW19 117 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 LIMS4P0CW20 117 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 GALP22466 123 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 CFL1P23528 166 aaKnown RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 RAB13P51153 203 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 RPL37P61927 97 aaKnown RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 TNFAIP6P98066 277 aaPredicted RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 RPL18Q07020 188 aaKnown RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 LINC01554Q52M75 96 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 LINC00523Q86TU6 105 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 TBC1D19Q8N5T2 526 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 FAM213BQ8TBF2 198 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 RASSF5Q8WWW0 418 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 TMEM106AQ96A25 262 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 LINC00052Q96N35 136 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 ERMAPQ96PL5 475 aaPredicted RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 TMEM109Q9BVC6 243 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 ULBP3Q9BZM4 244 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 METTL9Q9H1A3 318 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 MIXL1Q9H2W2 232 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 PSTPIP2Q9H939 334 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 HRASLSQ9HDD0 168 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 CHRAC1Q9NRG0 131 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 MED29Q9NX70 200 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 IL36BQ9NZH7 164 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 NXT1Q9UKK6 140 aaKnown RBP-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 ANAPC10Q9UM13 185 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 FREM3P0C091 2139 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 ERBINQ96RT1 1412 aa-0.98□□□□□ -2.57
NCKAP1-204ENST00000477988 DNAH6Q9C0G6 4158 aa-0.99□□□□□ -2.57
NCKAP1-204ENST00000477988 MXRA5Q9NR99 2828 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms