RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 SELLP14151 372 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 TEX36Q5VZQ5 186 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 TCF23Q7RTU1 214 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 TMEM256Q8N2U0 113 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 MS4A10Q96PG2 267 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 SLC35D1Q9NTN3 355 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 DOCK11Q5JSL3 2073 aa14.79□□□□□ -0.04
CCM2-209ENST00000477605 hADV38S2A0JD32 116 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 IGHV1-46P01743 117 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 CT45A6P0DMU7 189 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 CT45A5P0DMU8 189 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 CT45A7P0DMV0 189 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 C1orf194Q5T5A4 169 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 MIR17HGQ75NE6 70 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 CMTM2Q8TAZ6 248 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 NAGKQ9UJ70 344 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 TEX50A0A1B0GTY4 177 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 A0A1B0GV90 55 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 HELTA6NFD8 242 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 INS-IGF2F8WCM5 200 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 OR5G3P0C626 314 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 GNG4P50150 75 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 TPPP2P59282 170 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 RANP62826 216 aaKnown RBP14.78□□□□□ -0.04
CCM2-209ENST00000477605 C1orf185Q5T7R7 199 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 VHLLQ6RSH7 139 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 CACNG8Q8WXS5 425 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 RNF2Q99496 336 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 HINT2Q9BX68 163 aa14.78□□□□□ -0.04
CCM2-209ENST00000477605 SCGB1D1O95968 90 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 Q0VG73 95 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 PSG5Q15238 335 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 HLA-DRB5Q30154 266 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 FAM201AQ5SY85 155 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 OSR1Q8TAX0 266 aaPredicted RBP14.77□□□□□ -0.04
CCM2-209ENST00000477605 GNB1LQ9BYB4 327 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 MRPL18Q9H0U6 180 aaKnown RBP14.77□□□□□ -0.04
CCM2-209ENST00000477605 OSTCQ9NRP0 149 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 LINC00312Q9Y6C7 94 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 V9GYV3 84 aa14.77□□□□□ -0.04
CCM2-209ENST00000477605 ANKRD11Q6UB99 2663 aaPredicted RBP14.77□□□□□ -0.05
CCM2-209ENST00000477605 A0A1W2PRE2 83 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 MT-ND6P03923 174 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 OR4A8P0C604 315 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 IRF2P14316 349 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 CRISP2P16562 243 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 ERVFC1-1P60608 527 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 MMD2Q8IY49 270 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 MRPL32Q9BYC8 188 aaKnown RBP14.77□□□□□ -0.05
CCM2-209ENST00000477605 FAM215AQ9Y5M1 114 aa14.77□□□□□ -0.05
CCM2-209ENST00000477605 ZFHX4Q86UP3 3567 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 DIDO1Q9BTC0 2240 aaKnown RBP14.76□□□□□ -0.05
CCM2-209ENST00000477605 HNF1AP20823 631 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 MEF2CQ06413 473 aaPredicted RBP14.76□□□□□ -0.05
CCM2-209ENST00000477605 ALKBH2Q6NS38 261 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 WDR73Q6P4I2 378 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 ZNF833PQ6ZTB9 187 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 OR1L6Q8NGR2 347 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 CCL13Q99616 98 aa14.76□□□□□ -0.05
CCM2-209ENST00000477605 PKD1L2Q7Z442 2459 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 KIR2DL5BA0A0G2JN68 375 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 KIR2DL5BA0A0G2JPC4 375 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 GNG10P50151 68 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 TIGITQ495A1 244 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 KIR2DL5AQ8N109 375 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 NUP37Q8NFH4 326 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 GAL3ST2Q9H3Q3 398 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 TMEM106BQ9NUM4 274 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 CFAP47Q6ZTR5 3102 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 SLC17A3O00476 420 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 NUPR1O60356 82 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 RNASE2P10153 161 aaKnown RBP14.75□□□□□ -0.05
CCM2-209ENST00000477605 CBLN1P23435 193 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 CD69Q07108 199 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 CENPWQ5EE01 88 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 MISP3Q96FF7 219 aa14.75□□□□□ -0.05
CCM2-209ENST00000477605 NKX6-3A6NJ46 265 aa14.74□□□□□ -0.05
CCM2-209ENST00000477605 SRRM4A7MD48 611 aaKnown RBP14.74□□□□□ -0.05
CCM2-209ENST00000477605 FCN1O00602 326 aa14.74□□□□□ -0.05
CCM2-209ENST00000477605 ISLRO14498 428 aa14.74□□□□□ -0.05
CCM2-209ENST00000477605 ACTL6BO94805 426 aa14.74□□□□□ -0.05
CCM2-209ENST00000477605 APOA2P02652 100 aa14.74□□□□□ -0.05
CCM2-209ENST00000477605 C8orf88P0DMB2 117 aa14.74□□□□□ -0.05
CCM2-209ENST00000477605 DUX4L9Q6RFH8 374 aaPredicted RBP14.74□□□□□ -0.05
CCM2-209ENST00000477605 URB1O60287 2271 aaKnown RBP14.74□□□□□ -0.05
CCM2-209ENST00000477605 MYOD1P15172 320 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 CRYBB3P26998 211 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 CEACAM8P31997 349 aaPredicted RBP14.73□□□□□ -0.05
CCM2-209ENST00000477605 Q6ZS92 163 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 FAM216BQ8N7L0 139 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 DEFB108BQ8NET1 73 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 OR4A5Q8NH83 315 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 ZNF503Q96F45 646 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 TP53TG3Q9ULZ0 132 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 HCFC1P51610 2035 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 IGKV1OR2-108A0A075B7D4 117 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 MMP23AO75900 390 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 IGKV1-16P04430 117 aa14.73□□□□□ -0.05
CCM2-209ENST00000477605 SAA1P0DJI8 122 aaPredicted RBP14.73□□□□□ -0.05
CCM2-209ENST00000477605 CD40P25942 277 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms