RNA–Protein interactions for RNA: ENST00000477523.1

RGPD5-209, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 1 (best)

Gene RGPD5, Length 6,902 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-209ENST00000477523 PXMP4Q9Y6I8 212 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 POLQO75417 2590 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 FASNP49327 2511 aaKnown RBP3.67□□□□□ -1.82
RGPD5-209ENST00000477523 RNF224P0DH78 156 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 C5orf64Q2M2E5 130 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 MIC13Q5XKP0 118 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 SVBPQ8N300 66 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 COX7A2P2O60397 106 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 ARL16Q0P5N6 197 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 OR10W1Q8NGF6 305 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 RXFP4Q8TDU9 374 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 UHRF2Q96PU4 802 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 FAM103A1Q9BTL3 118 aaKnown RBP3.67□□□□□ -1.82
RGPD5-209ENST00000477523 RPRMQ9NS64 109 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 SLC45A2Q9UMX9 530 aa3.67□□□□□ -1.82
RGPD5-209ENST00000477523 IGHV1-69DA0A0B4J2H0 117 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 YIF1AO95070 293 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 SNAPINO95295 136 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 IGHV1-69P01742 117 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 GPX4P36969 197 aaPredicted RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 SRP14P37108 136 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TAGLN2P37802 199 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 CX3CL1P78423 397 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 LY6EQ16553 131 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 DEFB113Q30KQ7 82 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 CST9LP1Q5W188 147 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TMEM144Q7Z5S9 345 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 RNASEH2CQ8TDP1 164 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 NPIPB3Q92617 1050 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 ARPC1AQ92747 370 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 RNF2Q99496 336 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 ABCA12Q86UK0 2595 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 IGHV3-21A0A0B4J1V1 117 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 A0A1W2PPI3 338 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 GNG7O60262 68 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 OR7C2O60412 319 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 S100A7P31151 101 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 Q56UQ5 140 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TREML4Q6UXN2 200 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 STPG2Q8N412 459 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 CFAP54Q96N23 3096 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 MFSD2BA6NFX1 497 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 HMGB3O15347 200 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 HOXB4P17483 251 aaPredicted RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 FAM78BQ5VT40 261 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 NDUFA4L2Q9NRX3 87 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 ODF3BA8MYP8 253 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 SMAD7O15105 426 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 FCN3O75636 299 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 IL6RP08887 468 aaPredicted RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 FGF8P55075 233 aaPredicted RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 HAPLN4Q86UW8 402 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 OR1L4Q8NGR5 311 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 OR1P1Q8NH06 330 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 RCC1LQ96I51 464 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TBX15Q96SF7 602 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 REG4Q9BYZ8 158 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 LINC00869P0C866 280 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 RNASE2P10153 161 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 AREGP15514 252 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 ZP3P21754 424 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 ZNF674Q2M3X9 581 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 AARDQ4LEZ3 155 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 PFDN5Q99471 154 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TPSG1Q9NRR2 321 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TECRQ9NZ01 308 aaKnown RBP3.66□□□□□ -1.82
RGPD5-209ENST00000477523 CSPG4Q6UVK1 2322 aa3.66□□□□□ -1.82
RGPD5-209ENST00000477523 TMEM218A2RU14 115 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 M0QZK8 103 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 CNTFRP26992 372 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 RUSC1-AS1Q66K80 236 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 LRRC75A-AS1Q8N1F1 130 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 RAB24Q969Q5 203 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 P2RX4Q99571 388 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 C11orf1Q9H5F2 150 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 TNFRSF19Q9NS68 423 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 RBFOX3A6NFN3 312 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 SFTA3P0C7M3 94 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 FAM157CP0CG43 387 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 PAX6P26367 422 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 WT1-ASQ06250 92 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 STPG3Q8N7X2 389 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 MAPK1IP1LQ8NDC0 245 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 OR4X1Q8NH49 305 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 GATAD1Q8WUU5 269 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 SLC25A33Q9BSK2 321 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 PARD6GQ9BYG4 376 aaPredicted RBP3.65□□□□□ -1.82
RGPD5-209ENST00000477523 WNT10AQ9GZT5 417 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 DOK5Q9P104 306 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 MOB4Q9Y3A3 225 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 PUS1Q9Y606 427 aaKnown RBP eCLIP3.65□□□□□ -1.82
RGPD5-209ENST00000477523 UBE2G2P60604 165 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 OR5T1Q8NG75 326 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 NIPSNAP3BQ9BS92 247 aa3.65□□□□□ -1.82
RGPD5-209ENST00000477523 DMXL1Q9Y485 3027 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 MUC3AQ02505 3323 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 H3BUX3 64 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 J3QLI3 93 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 BCL2P10415 239 aa3.65□□□□□ -1.83
RGPD5-209ENST00000477523 PLA2G2AP14555 144 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms