RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 OR9G9P0C7N8 305 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 SRSF6Q13247 344 aaKnown RBP12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 Q56UQ5 140 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 DOLPP1Q86YN1 238 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 OR2V2Q96R30 315 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 RNASE7Q9H1E1 156 aaKnown RBP12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 SEPSECSQ9HD40 501 aaKnown RBP12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 BOKQ9UMX3 212 aaPredicted RBP12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 HCFC1P51610 2035 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 A0A0G2JMM0 328 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 A0A1W2PPB8 328 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 C2orf70A6NJV1 201 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 KIR3DP1A8MWS1 328 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 M0QZ24 198 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 HAND1O96004 215 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 ERVK-16P61578 105 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 MAJINQ3KP22 176 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 OR52L2PQ8NGH6 319 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 CHRDL1Q9BU40 450 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 TMEM70Q9BUB7 260 aa12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
CLSTN1-205ENST00000477264 A0A096LPE4 126 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 CRXO43186 299 aaPredicted RBP12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 SPINK4O60575 86 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 PPOXP50336 477 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 FOXC1Q12948 553 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR27Q6MZM9 219 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 EBLN2Q6P2I7 272 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 TRAT1Q6PIZ9 186 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 FAM231DQ6ZW35 169 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 IGF2BP2-AS1Q96M15 143 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 SPOCK3Q9BQ16 436 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 FAM173AQ9BQD7 235 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 TECRQ9NZ01 308 aaKnown RBP12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 CNTRLQ7Z7A1 2325 aa12.58□□□□□ -0.4
CLSTN1-205ENST00000477264 LINC00473A8K010 186 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 M0R1X1 148 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 CGAP01215 116 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 IGHV3-9P01782 118 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 CRYBB3P26998 211 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 GDF1P27539 372 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 DUTP33316 252 aaKnown RBP12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR20EP86478 221 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR20CP86479 221 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR20DP86480 221 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR20BP86481 221 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 PRR20AP86496 221 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 FXYD3Q14802 87 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 TNXAQ16473 311 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 SPATA31B1PQ5VZV4 182 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 MED12LQ86YW9 2145 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 SSMEM1Q8WWF3 244 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 C19orf24Q9BVV8 132 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 TCL1AP56279 114 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 TAS2R45P59539 299 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 SLAQ13239 276 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 GABRA6Q16445 453 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 ATP5L2Q7Z4Y8 100 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 SPACA3Q8IXA5 215 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 ZNF596Q8TC21 504 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 B4GALT7Q9UBV7 327 aa12.57□□□□□ -0.4
CLSTN1-205ENST00000477264 A0A1W2PRE2 83 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 CCL11P51671 97 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 PSG5Q15238 335 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 WIPI1Q5MNZ9 446 aaPredicted RBP12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 FAM71F2Q6NXP2 309 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 SLC25A34Q6PIV7 304 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 TNFRSF19Q9NS68 423 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 CD5LO43866 347 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 PSG1P11464 419 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 CD46P15529 392 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 ARF6P62330 175 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 WDR86Q86TI4 376 aa12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 KLF13Q9Y2Y9 288 aaPredicted RBP12.56□□□□□ -0.4
CLSTN1-205ENST00000477264 CELSR3Q9NYQ7 3312 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 OR4C46A6NHA9 309 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 HSBP1L1C9JCN9 74 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 ADH4P08319 380 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 RFPL3SP0C7P2 107 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 SLC35B1P78383 322 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 RELBQ01201 579 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 MPV17L2Q567V2 206 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 RNASEKQ6P5S7 137 aaKnown RBP12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 MBD6Q96DN6 1003 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 C1orf159Q96HA4 380 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 GRAMD2BQ96HH9 432 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 SERTAD4Q9NUC0 356 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 ASPMQ8IZT6 3477 aa12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 TET2Q6N021 2002 aaPredicted RBP12.55□□□□□ -0.4
CLSTN1-205ENST00000477264 PINLYPA6NC86 204 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 ZNF503-AS2A6NEH8 195 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 KLRC4-KLRK1H3BQV0 150 aa12.54□□□□□ -0.4
CLSTN1-205ENST00000477264 FOXH1O75593 365 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms