RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 DIABLOQ9NR28 239 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 EHFQ9NZC4 300 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 NSG2Q9Y328 171 aa9.66□□□□□ -0.86
MRPL55-228ENST00000476267 LOC100506127A0A0U1RQW1 187 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 ZNF207O43670 478 aaKnown RBP9.65□□□□□ -0.86
MRPL55-228ENST00000476267 KRASP01116 189 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 G6PCP35575 357 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 TGFBR1P36897 503 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 LPAR6P43657 344 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 ZNF124Q15973 351 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
MRPL55-228ENST00000476267 STPG3Q8N7X2 389 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 DGCR14Q96DF8 476 aaKnown RBP9.65□□□□□ -0.86
MRPL55-228ENST00000476267 RNF2Q99496 336 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 ZNF2Q9BSG1 426 aaPredicted RBP9.65□□□□□ -0.86
MRPL55-228ENST00000476267 KRTAP17-1Q9BYP8 105 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 SMPXQ9UHP9 88 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 OR51B2Q9Y5P1 312 aa9.65□□□□□ -0.86
MRPL55-228ENST00000476267 IGHV7-4-1A0A0J9YVY3 117 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 C15orf61A6NNL5 157 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 I3L2K1 104 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 CHEK1O14757 476 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 RPL35AP18077 110 aaKnown RBP9.64□□□□□ -0.87
MRPL55-228ENST00000476267 ERVK-16P61578 105 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 FAM90A2PQ658T7 463 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 APRG1Q8IVJ8 170 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 ZNF114Q8NC26 417 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 OR1P1Q8NH06 330 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 OR5B3Q8NH48 314 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 C20orf24Q9BUV8 137 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 PRNDQ9UKY0 176 aa9.64□□□□□ -0.87
MRPL55-228ENST00000476267 ATP6V1G2O95670 118 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 IGKV1-39P01597 117 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 PMP2P02689 132 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 IGKV1D-39P04432 117 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 TAS2R20P59543 309 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 UBE2NLQ5JXB2 153 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 LYSMD2Q8IV50 215 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 UBAC2Q8NBM4 344 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 PHLDA1Q8WV24 401 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-228ENST00000476267 HINT2Q9BX68 163 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 IFT46Q9NQC8 304 aa9.63□□□□□ -0.87
MRPL55-228ENST00000476267 FAM212BQ9NTI7 297 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-228ENST00000476267 KLK5Q9Y337 293 aaPredicted RBP9.63□□□□□ -0.87
MRPL55-228ENST00000476267 GPR31O00270 319 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 RELQ04864 619 aaPredicted RBP9.62□□□□□ -0.87
MRPL55-228ENST00000476267 NEDD8Q15843 81 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 Q56UQ5 140 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 TMEM217Q8N7C4 229 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 TMEM116Q8NCL8 245 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 S100A16Q96FQ6 103 aaKnown RBP9.62□□□□□ -0.87
MRPL55-228ENST00000476267 SEC22AQ96IW7 307 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 TMEM56Q96MV1 263 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 RHPN1-AS1Q9BWJ2 59 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 NXF2Q9GZY0 626 aaKnown RBP9.62□□□□□ -0.87
MRPL55-228ENST00000476267 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
MRPL55-228ENST00000476267 DNAH2Q9P225 4427 aa9.62□□□□□ -0.87
MRPL55-228ENST00000476267 FAT2Q9NYQ8 4349 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 DEDDO75618 318 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 SNAPC5O75971 98 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 RPS19P39019 145 aaKnown RBP9.61□□□□□ -0.87
MRPL55-228ENST00000476267 TAS2R46P59540 309 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 TMEM69Q5SWH9 247 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 CROCCP3Q8IVE0 287 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 CMTM1Q8IZ96 169 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 OR5H2Q8NGV7 314 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 GATAD1Q8WUU5 269 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 TSC22D3Q99576 134 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 TXN2Q99757 166 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 CSTL1Q9H114 145 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 FKBP11Q9NYL4 201 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 PCLOQ9Y6V0 5065 aa9.61□□□□□ -0.87
MRPL55-228ENST00000476267 IGHV3-49A0A0A0MS15 119 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 HRH1P35367 487 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 PRCDQ00LT1 54 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 KCTD21Q4G0X4 260 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 SAMD12Q8N8I0 201 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 OR6F1Q8NGZ6 308 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 GPX8Q8TED1 209 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 SLC25A46Q96AG3 418 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 Q9H521 79 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 VSIRQ9H7M9 311 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 KIAA1109Q2LD37 5005 aa9.6□□□□□ -0.87
MRPL55-228ENST00000476267 TRAV14DV4A0A0A6YYC5 116 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 NUPL2O15504 423 aaKnown RBP9.59□□□□□ -0.87
MRPL55-228ENST00000476267 MT-CO2P00403 227 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 MFAP4P55083 255 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 CMC4P56277 68 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-228ENST00000476267 PHLDA2Q53GA4 152 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 PVRIGQ6DKI7 326 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 TBC1D26Q86UD7 250 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 LILRB2Q8N423 598 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 YIPF6Q96EC8 236 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 RARRES2Q99969 163 aa9.59□□□□□ -0.87
MRPL55-228ENST00000476267 C6orf62Q9GZU0 229 aaPredicted RBP9.59□□□□□ -0.87
MRPL55-228ENST00000476267 IGHV3OR16-13A0A075B7E8 117 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms