RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CLLU1Q5K131 121 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 SPANXN5Q5MJ07 72 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 FAM120AOSQ5T036 256 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 RUSC1-AS1Q66K80 236 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 RPL7L1Q6DKI1 246 aaKnown RBP5.26□□□□□ -1.57
ATG4A-207ENST00000474825 ZNF562Q6V9R5 426 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 STX12Q86Y82 276 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 PDZD9Q8IXQ8 264 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 Q8N9W7 124 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 OR1S2Q8NGQ3 325 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 OR5C1Q8NGR4 320 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 ZNF471Q9BX82 626 aaPredicted RBP5.26□□□□□ -1.57
ATG4A-207ENST00000474825 COMMD5Q9GZQ3 224 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 HIPK2Q9H2X6 1198 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 METTL1Q9UBP6 276 aaKnown RBP5.26□□□□□ -1.57
ATG4A-207ENST00000474825 NUP50Q9UKX7 468 aa5.26□□□□□ -1.57
ATG4A-207ENST00000474825 TEP1Q99973 2627 aaKnown RBP5.26□□□□□ -1.57
ATG4A-207ENST00000474825 TNCP24821 2201 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 WNK2Q9Y3S1 2297 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 ZFHX3Q15911 3703 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 C2CD3Q4AC94 2353 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 BORCS7-ASMTA0A0B4J1R7 106 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 A0A0U1RQK1 487 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 A6NDX4 124 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 H3BP45 60 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 FGF16O43320 207 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 CRYGCP07315 174 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 FBP1P09467 338 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 FAM157CP0CG43 387 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 SPP1P10451 314 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 PAX6P26367 422 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 RPL27AP46776 148 aaKnown RBP5.25□□□□□ -1.57
ATG4A-207ENST00000474825 DLK1P80370 383 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 WT1-ASQ06250 92 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 MMDQ15546 238 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 LRRC75BQ2VPJ9 315 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 CLEC9AQ6UXN8 241 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 CIARTQ8N365 385 aaPredicted RBP5.25□□□□□ -1.57
ATG4A-207ENST00000474825 SLC24A4Q8NFF2 622 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 OR10P1Q8NGE3 313 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 RNASEH2CQ8TDP1 164 aaKnown RBP5.25□□□□□ -1.57
ATG4A-207ENST00000474825 PINX1Q96BK5 328 aaKnown RBP5.25□□□□□ -1.57
ATG4A-207ENST00000474825 RBM14Q96PK6 669 aaKnown RBP5.25□□□□□ -1.57
ATG4A-207ENST00000474825 ATP5SQ99766 215 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 FBXL15Q9H469 300 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 PLEKHA3Q9HB20 300 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 HEYLQ9NQ87 328 aaPredicted RBP5.25□□□□□ -1.57
ATG4A-207ENST00000474825 C1RLQ9NZP8 487 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 KIAA1456Q9P272 454 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 UBQLN2Q9UHD9 624 aa5.25□□□□□ -1.57
ATG4A-207ENST00000474825 CR1P17927 2039 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 LINC00862A6NCI5 91 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CA2P00918 260 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 AMY1AP04745 511 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 NMBP08949 121 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 EGR2P11161 476 aaPredicted RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM11P17152 192 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CTRB1P17538 263 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CD24P25063 80 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 NPY1RP25929 384 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 GPX4P36969 197 aaPredicted RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 HOXA1P49639 335 aaPredicted RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 SULT1A2P50226 295 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CRIP2P52943 208 aaPredicted RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 RAB11AP62491 216 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CX3CL1P78423 397 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 ERHP84090 104 aaKnown RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 SLC38A11Q08AI6 406 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM267Q0VDI3 215 aaPredicted RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 SPINK9Q5DT21 86 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 C10orf55Q5SWW7 151 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CTRB2Q6GPI1 263 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 EIF5AL1Q6IS14 154 aaKnown RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 BRD3OSQ6XYD6 125 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 ETV3LQ6ZN32 361 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 C16orf82Q7Z2V1 217 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 MRPL41Q8IXM3 137 aaKnown RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 TEX29Q8N6K0 151 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM217Q8N7C4 229 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 MAPK1IP1LQ8NDC0 245 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 OR10W1Q8NGF6 305 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 OR1P1Q8NH06 330 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 NANPQ8TBE9 248 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 LRRC20Q8TCA0 184 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 SRSF12Q8WXF0 261 aaKnown RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CACNG8Q8WXS5 425 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 GNPNAT1Q96EK6 184 aaPredicted RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 CLCC1Q96S66 551 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 P2RX4Q99571 388 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 TMEM147Q9BVK8 224 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 SMIM3Q9BZL3 60 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 WDR61Q9GZS3 305 aaKnown RBP5.24□□□□□ -1.57
ATG4A-207ENST00000474825 SLC25A32Q9H2D1 315 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 ENY2Q9NPA8 101 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 ZC4H2Q9NQZ6 224 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 MED9Q9NWA0 146 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 ZNF580Q9UK33 172 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 WDR83OSQ9Y284 106 aa5.24□□□□□ -1.57
ATG4A-207ENST00000474825 LSM4Q9Y4Z0 139 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms