RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, human

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-222	ENST00000474742	HSPB8	Q9UJY1	196 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF222	Q9UK12	451 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	PCTP	Q9UKL6	214 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	PRND	Q9UKY0	176 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	TBX21	Q9UL17	535 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	ANAPC10	Q9UM13	185 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	BAIAP2	Q9UQB8	552 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF257	Q9Y2Q1	563 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	KLF13	Q9Y2Y9	288 aa	Predicted RBP	0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	NOP16	Q9Y3C1	178 aa	Known RBP	0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	NUBP2	Q9Y5Y2	271 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	ICOS	Q9Y6W8	199 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	MIA3	Q5JRA6	1907 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	FBN3	Q75N90	2809 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	DENND4A	Q7Z401	1863 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	ITGB4	P16144	1822 aa		0.5	□□□□□ -2.33
HDAC9-222	ENST00000474742	EIF4G3	O43432	1585 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SMARCA2	P51531	1590 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PEG3	Q9GZU2	1588 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FAM135A	Q9P2D6	1515 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CECR2	Q9BXF3	1484 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CCDC144A	A2RUR9	1427 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PIK3C2G	O75747	1445 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ATRN	O75882	1429 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ATG2B	Q96BY7	2078 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	KTN1	Q86UP2	1357 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	KIF15	Q9NS87	1388 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	NUP205	Q92621	2012 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PTPRJ	Q12913	1337 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	BAZ2A	Q9UIF9	1905 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGLV4-69	A0A075B6H9	119 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGLV4-60	A0A075B6I1	120 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TRBV24-1	A0A075B6N3	115 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGKV2-28	A0A075B6P5	120 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TRAV36DV7	A0A075B6V5	113 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGHV3OR15-7	A0A075B7D8	119 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		A0A087WUJ7	227 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	MEIKIN	A0A087WXM9	373 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGLV1-36	A0A0B4J1U3	117 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGHV3-73	A0A0B4J1V6	119 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TRAV13-1	A0A0B4J241	112 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TRAV40	A0A0B4J280	105 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CCL15-CCL14	A0A0B4J2E2	113 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGHV7-4-1	A0A0J9YVY3	117 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		A0A0J9YW62	118 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		A0A0J9YY10	115 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FAM236D	A0A1B0GTK5	79 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LOC105371267	A0A1B0GV96	52 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LOC107986453	A0A1B0GWG9	222 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		A0A1B0GX78	115 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMEM150B	A6NC51	233 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TMEM235	A6NFC5	223 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TLCD2	A6NGC4	264 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR2T8	A6NH00	312 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF850	A8MQ14	1090 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	HMSD	A8MTL9	139 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	BTNL10	A8MVZ5	291 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		A8MWV9	139 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF736	B4DX44	427 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGLL5	B9A064	214 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	C17orf112	F2Z3M2	114 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		F6UZH7	168 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742		F8W036	122 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SDCBP	O00560	298 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CDC42EP2	O14613	210 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TAX1BP3	O14907	124 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CD5L	O43866	347 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OR2T1	O43869	369 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SH2D1A	O60880	128 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	TNFSF15	O95150	251 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	NDUFB2	O95178	105 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	NAPSA	O96009	420 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IFNA17	P01571	189 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGKV1D-16	P01601	117 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGKV2D-28	P01615	120 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGLV2-23	P01705	113 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGHV1-69	P01742	117 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGHV1-46	P01743	117 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	IGHM	P01871	453 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PPBP	P02775	128 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OPN1SW	P03999	348 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	REG1A	P05451	166 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CSN2	P05814	226 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	CRYGD	P07320	174 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	MSMB	P08118	114 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	LGALS1	P09382	135 aa	Known RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF705B	P0CI00	300 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	AKAIN1	P0CW23	69 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SMIM6	P0DI80	62 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF728	P0DKX0	622 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SMIM10L2A	P0DMW4	78 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	SMIM10L2B	P0DMW5	78 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FAM236C	P0DP71	79 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	FGF6	P10767	208 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	PIP	P12273	146 aa	Predicted RBP	0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ZNF823	P16415	610 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	S100A11	P31949	105 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OPRM1	P35372	400 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	OPRK1	P41145	380 aa		0.49	□□□□□ -2.33
HDAC9-222	ENST00000474742	ETV6	P41212	452 aa		0.49	□□□□□ -2.33

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