RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 MMD2Q8IY49 270 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 KIR3DL3Q8N743 410 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 OR10W1Q8NGF6 305 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 GATAD1Q8WUU5 269 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 HINT2Q9BX68 163 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 PARLQ9H300 379 aa7.9□□□□□ -1.14
USP39-214ENST00000474572 PSMB11A5LHX3 300 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 ODF3BA8MYP8 253 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 F6UZH7 168 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 SLC25A17O43808 307 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 PDE6DO43924 150 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 OPN1MWP04001 364 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 OR5G3P0C626 314 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 OPN1MW2P0DN77 364 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 OPN1MW3P0DN78 364 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 RAB5AP20339 215 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 NPPCP23582 126 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 RHOBP62745 196 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 PSG5Q15238 335 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 ELOBQ15370 118 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 PRSS8Q16651 343 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 SMUG1Q53HV7 270 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 C10orf55Q5SWW7 151 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 SLC16A13Q7RTY0 426 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 THAP8Q8NA92 274 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 ABHD5Q8WTS1 349 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 SSMEM1Q8WWF3 244 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 RITA1Q96K30 269 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 C19orf24Q9BVV8 132 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 CTDSP1Q9GZU7 261 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 TPSG1Q9NRR2 321 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 SIGLEC9Q9Y336 463 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 CEP295Q9C0D2 2601 aa7.89□□□□□ -1.15
USP39-214ENST00000474572 PIEZO2Q9H5I5 2752 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 IGLC7A0M8Q6 106 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 C11orf94C9JXX5 98 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 LY6HO94772 140 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 VENTXO95231 258 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 GOSR1O95249 250 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 CRYGCP07315 174 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 ARL14EPLP0DKL9 152 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 UQCRFS1P47985 274 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 ATP5G3P48201 142 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 SUB1P53999 127 aaKnown RBP eCLIP7.88□□□□□ -1.15
USP39-214ENST00000474572 DLX1P56177 255 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 RAB5BP61020 215 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 RPL23P62829 140 aaKnown RBP7.88□□□□□ -1.15
USP39-214ENST00000474572 TMEM241Q24JQ0 296 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 LDLRAD2Q5SZI1 272 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 TPTE2P1Q5T6R2 138 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 HCP5Q6MZN7 132 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 C1orf122Q6ZSJ8 110 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 MOB3BQ86TA1 216 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 MRPL41Q8IXM3 137 aaKnown RBP7.88□□□□□ -1.15
USP39-214ENST00000474572 FAM24BQ8N5W8 94 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 OR4F5Q8NH21 305 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 NANPQ8TBE9 248 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 CFHR4Q92496 578 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 OR4F4Q96R69 305 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 SSBP3Q9BWW4 388 aaPredicted RBP7.88□□□□□ -1.15
USP39-214ENST00000474572 FNDC4Q9H6D8 234 aaPredicted RBP7.88□□□□□ -1.15
USP39-214ENST00000474572 PRELID1Q9Y255 219 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 INSIG2Q9Y5U4 225 aa7.88□□□□□ -1.15
USP39-214ENST00000474572 RP1L1Q8IWN7 2480 aaPredicted RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 LOC105371242A0A075B767 164 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 IGHV3-72A0A0B4J1Y9 119 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 C1orf196B1AJZ1 125 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 CLDN34H7C241 214 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 CLN5O75503 358 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 AREGP15514 252 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 GNLYP22749 145 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 PRTN3P24158 256 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 CNTFRP26992 372 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 GCHFRP30047 84 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 OR10J1P30954 320 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 RPL27AP46776 148 aaKnown RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 COMPP49747 757 aaPredicted RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 GNB1P62873 340 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 SSBP2P81877 361 aaPredicted RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 Q8WTZ3 238 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 IGFBPL1Q8WX77 278 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 C11orf52Q96A22 123 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 RPEQ96AT9 228 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 FAM122AQ96E09 287 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 RNF2Q99496 336 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 SRSF8Q9BRL6 282 aaKnown RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 MRPL32Q9BYC8 188 aaKnown RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 SEPSECSQ9HD40 501 aaKnown RBP7.87□□□□□ -1.15
USP39-214ENST00000474572 BIN3Q9NQY0 253 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 DOK5Q9P104 306 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 FUT9Q9Y231 359 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 PKDREJQ9NTG1 2253 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 IGF2RP11717 2491 aa7.87□□□□□ -1.15
USP39-214ENST00000474572 IGKV1D-37A0A075B6S9 117 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 TEX22C9J3V5 150 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 C19orf84I3L1E1 186 aa7.86□□□□□ -1.15
USP39-214ENST00000474572 ENSAO43768 121 aaKnown RBP7.86□□□□□ -1.15
USP39-214ENST00000474572 NDUFA3O95167 84 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms