RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LSM4Q9Y4Z0 139 aaKnown RBP6.68□□□□□ -1.34
CCDC93-208ENST00000474546 V9GYV3 84 aa6.68□□□□□ -1.34
CCDC93-208ENST00000474546 FER1L5A0AVI2 2057 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 ARID1BQ8NFD5 2236 aaPredicted RBP6.67□□□□□ -1.34
CCDC93-208ENST00000474546 IGHV2OR16-5A0A0B4J2B6 119 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 IGHV2-70DA0A0C4DH43 119 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 FAM231BA6NCW3 169 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 C22orf46C9J442 243 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 AQP7O14520 342 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 TCF21O43680 179 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 HYPMO75409 117 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 OR2J3O76001 311 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 HBZP02008 142 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 CBLN1P23435 193 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 TSPOP30536 169 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 PPOXP50336 477 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 EDDM3BP56851 147 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 SSPNQ14714 243 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 EFNB3Q15768 340 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 BATFQ16520 125 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 SPATA46Q5T0L3 261 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 IBA57Q5T440 356 aaKnown RBP6.67□□□□□ -1.34
CCDC93-208ENST00000474546 TMEM136Q6ZRR5 245 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 PRR18Q8N4B5 295 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF439Q8NDP4 499 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 OR1L1Q8NH94 360 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 GATAD1Q8WUU5 269 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 RLN3Q8WXF3 142 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 CACNG8Q8WXS5 425 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 S1PR3Q99500 378 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 TMEM191AQ9H0A3 160 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 CXXC4Q9H2H0 198 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 GNB4Q9HAV0 340 aa6.67□□□□□ -1.34
CCDC93-208ENST00000474546 FOXA2Q9Y261 457 aaPredicted RBP6.67□□□□□ -1.34
CCDC93-208ENST00000474546 COL6A5A8TX70 2615 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 ARID1AO14497 2285 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 A0A1B0GW15 77 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 SCO2A0A1W2PP80 73 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 A0A1W2PS18 150 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 C12orf77C9JDV5 145 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 CRXO43186 299 aaPredicted RBP6.66□□□□□ -1.34
CCDC93-208ENST00000474546 DUTP33316 252 aaKnown RBP6.66□□□□□ -1.34
CCDC93-208ENST00000474546 WNT5AP41221 380 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 VDAC2P45880 294 aaPredicted RBP6.66□□□□□ -1.34
CCDC93-208ENST00000474546 BPIFB3P59826 476 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 UBE2G1P62253 170 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 ARG2P78540 354 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 ZNF816Q0VGE8 651 aaPredicted RBP6.66□□□□□ -1.34
CCDC93-208ENST00000474546 POU2AF1Q16633 256 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 TBR1Q16650 682 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 CR1LQ2VPA4 569 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 YRDCQ86U90 279 aaKnown RBP6.66□□□□□ -1.34
CCDC93-208ENST00000474546 MUC15Q8N387 334 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 STPG3Q8N7X2 389 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 DPF1Q92782 380 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 GRAMD2BQ96HH9 432 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 OBP2BQ9NPH6 170 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 SEC16AO15027 2179 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 SDK2Q58EX2 2172 aa6.66□□□□□ -1.34
CCDC93-208ENST00000474546 TRAV38-1A0A0B4J264 116 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 GRIFINA4D1Z8 144 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 C15orf61A6NNL5 157 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PRSS46E5RG02 174 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 INS-IGF2F8WCM5 200 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 RAMP3O60896 148 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 KLF7O75840 302 aaPredicted RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 CRYAAP02489 173 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PATE4P0C8F1 98 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 CA6P23280 308 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 HOXC12P31275 282 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 COMPP49747 757 aaPredicted RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 SUB1P53999 127 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 HSPE1P61604 102 aaKnown RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 RHOGP84095 191 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PRR20EP86478 221 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PRR20CP86479 221 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PRR20DP86480 221 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PRR20BP86481 221 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 PRR20AP86496 221 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 CLEC12BQ2HXU8 276 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 FBLN7Q53RD9 439 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 CENPWQ5EE01 88 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 OR8I2Q8N0Y5 310 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 GCSAMQ8N6F7 178 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 Q8N7P7 452 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 C1orf162Q8NEQ5 155 aaPredicted RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 OR8B3Q8NGG8 313 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 FGFBP3Q8TAT2 258 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 ABHD3Q8WU67 409 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 NEUROG1Q92886 237 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 THOC3Q96J01 351 aaKnown RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 CYYR1Q96J86 154 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 OR8B2Q96RD0 313 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 MGST2Q99735 147 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 ALKBH7Q9BT30 221 aaPredicted RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 TMEM70Q9BUB7 260 aa6.65□□□□□ -1.34
CCDC93-208ENST00000474546 FGF23Q9GZV9 251 aaPredicted RBP6.65□□□□□ -1.34
CCDC93-208ENST00000474546 GFRA4Q9GZZ7 299 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms