RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 GBGT1Q8N5D6 347 aa12.61□□□□□ -0.39
CUL4A-208ENST00000474116 UBAC2Q8NBM4 344 aa12.61□□□□□ -0.39
CUL4A-208ENST00000474116 ZBTB34Q8NCN2 500 aa12.61□□□□□ -0.39
CUL4A-208ENST00000474116 SECTM1Q8WVN6 248 aa12.61□□□□□ -0.39
CUL4A-208ENST00000474116 NDUFA4L2Q9NRX3 87 aa12.61□□□□□ -0.39
CUL4A-208ENST00000474116 TRAV10A0A0B4J240 114 aa12.6□□□□□ -0.39
CUL4A-208ENST00000474116 IGHV4-28A0A0C4DH34 117 aa12.6□□□□□ -0.39
CUL4A-208ENST00000474116 TMEM235A6NFC5 223 aa12.6□□□□□ -0.39
CUL4A-208ENST00000474116 GIG44P09565 113 aaPredicted RBP12.6□□□□□ -0.39
CUL4A-208ENST00000474116 GABARAPL2P60520 117 aa12.6□□□□□ -0.39
CUL4A-208ENST00000474116 Q56UQ5 140 aa12.6□□□□□ -0.39
CUL4A-208ENST00000474116 DGCR14Q96DF8 476 aaKnown RBP12.6□□□□□ -0.39
CUL4A-208ENST00000474116 PLEKHA2Q9HB19 425 aa12.6□□□□□ -0.39
CUL4A-208ENST00000474116 PTHLHP12272 177 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 RAB3BP20337 219 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 FCGR2CP31995 323 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 PVRIGQ6DKI7 326 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 DMBX1Q8NFW5 382 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 OR1L8Q8NGR8 309 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 OR13F1Q8NGS4 319 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 RNF126Q9BV68 326 aa12.59□□□□□ -0.39
CUL4A-208ENST00000474116 YTHDF1Q9BYJ9 559 aaKnown RBP12.59□□□□□ -0.39
CUL4A-208ENST00000474116 HSPG2P98160 4391 aa12.58□□□□□ -0.39
CUL4A-208ENST00000474116 ELOA3CA0A087WX78 387 aaPredicted RBP12.58□□□□□ -0.4
CUL4A-208ENST00000474116 TRAV14DV4A0A0A6YYC5 116 aa12.58□□□□□ -0.4
CUL4A-208ENST00000474116 RELQ04864 619 aaPredicted RBP12.58□□□□□ -0.4
CUL4A-208ENST00000474116 LEMD1Q68G75 181 aa12.58□□□□□ -0.4
CUL4A-208ENST00000474116 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
CUL4A-208ENST00000474116 CMTM3Q96MX0 182 aa12.58□□□□□ -0.4
CUL4A-208ENST00000474116 IGHV3OR16-13A0A075B7E8 117 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 IGHV3-74A0A0B4J1X5 117 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 NUPL2O15504 423 aaKnown RBP12.57□□□□□ -0.4
CUL4A-208ENST00000474116 DFFBO76075 338 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 PPYP01298 95 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 MIFP14174 115 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 GNG2P59768 71 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 DEFB131AP59861 70 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 PAFAH1B2P68402 229 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 CATR1Q13166 79 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 TCF24Q7RTU0 167 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 LILRB2Q8N423 598 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 FAM24BQ8N5W8 94 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 LSM10Q969L4 123 aaKnown RBP12.57□□□□□ -0.4
CUL4A-208ENST00000474116 SLC5A7Q9GZV3 580 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 MS4A6AQ9H2W1 248 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 X6R8D5 127 aa12.57□□□□□ -0.4
CUL4A-208ENST00000474116 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
CUL4A-208ENST00000474116 M0R2N4 97 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 YIF1AO95070 293 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 MYL9P24844 172 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 UBE2UQ5VVX9 321 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 ZNF818PQ6ZRF7 136 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 HINT2Q9BX68 163 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 NXF2Q9GZY0 626 aaKnown RBP12.56□□□□□ -0.4
CUL4A-208ENST00000474116 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 COMMD9Q9P000 198 aa12.56□□□□□ -0.4
CUL4A-208ENST00000474116 I3L2K1 104 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 APOHP02749 345 aaPredicted RBP12.55□□□□□ -0.4
CUL4A-208ENST00000474116 AMBPP02760 352 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 CD5P06127 495 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 P0DMU3 169 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 FAM231AP0DMU4 169 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 FAM231CP0DMU5 169 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 LGALS9BQ3B8N2 356 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 BEST4Q8NFU0 473 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 OR51H1Q8NH63 302 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 ST8SIA2Q92186 375 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 NDUFB11Q9NX14 153 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 OR51B2Q9Y5P1 312 aa12.55□□□□□ -0.4
CUL4A-208ENST00000474116 TRAV2A0A0B4J234 112 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 TRDV1A0A1B0GX56 115 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 SMIM30A4D0T7 59 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 MARCH11A6NNE9 402 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 MFAP4P55083 255 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 ARPC4P59998 168 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 C12orf74Q32Q52 190 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 TMEM41BQ5BJD5 291 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 TRPT1Q86TN4 253 aaKnown RBP12.54□□□□□ -0.4
CUL4A-208ENST00000474116 STHQ8IWL8 128 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 CADM3Q8N126 398 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 OR1P1Q8NH06 330 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 TXN2Q99757 166 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 NSG2Q9Y328 171 aa12.54□□□□□ -0.4
CUL4A-208ENST00000474116 DEFB131BA0A096LNP1 70 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 DNASE2O00115 360 aaPredicted RBP12.53□□□□□ -0.4
CUL4A-208ENST00000474116 SCGNO76038 276 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 PSMB9P28065 219 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 AADACL3Q5VUY0 350 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 HOGA1Q86XE5 327 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 ZNF575Q86XF7 245 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
CUL4A-208ENST00000474116 DBX1A6NMT0 343 aa12.52□□□□□ -0.41
CUL4A-208ENST00000474116 ST8SIA3O43173 380 aa12.52□□□□□ -0.41
CUL4A-208ENST00000474116 C4BPBP20851 252 aa12.52□□□□□ -0.41
CUL4A-208ENST00000474116 GNRHRP30968 328 aa12.52□□□□□ -0.41
CUL4A-208ENST00000474116 FXYD4P59646 89 aa12.52□□□□□ -0.41
CUL4A-208ENST00000474116 ERVK-16P61578 105 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms