RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TMEM187Q14656 261 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 IZUMO4Q1ZYL8 232 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 C19orf35Q6ZS72 473 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 FANCD2OSQ96PS1 177 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 ELOVL1Q9BW60 279 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.61□□□□□ -0.71
USF1-205ENST00000473969 CACFD1Q9UGQ2 172 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 TMEM56-RWDD3S4R434 201 aa10.61□□□□□ -0.71
USF1-205ENST00000473969 IGLV11-55A0A075B6I3 123 aa10.6□□□□□ -0.71
USF1-205ENST00000473969 A0A0B4J293 547 aa10.6□□□□□ -0.71
USF1-205ENST00000473969 DBX1A6NMT0 343 aa10.6□□□□□ -0.71
USF1-205ENST00000473969 HOXD3P31249 432 aaPredicted RBP10.6□□□□□ -0.71
USF1-205ENST00000473969 SNCAP37840 140 aa10.6□□□□□ -0.71
USF1-205ENST00000473969 WT1-ASQ06250 92 aa10.6□□□□□ -0.71
USF1-205ENST00000473969 DLX4Q92988 240 aaPredicted RBP10.6□□□□□ -0.71
USF1-205ENST00000473969 WDR12Q9GZL7 423 aaKnown RBP10.6□□□□□ -0.71
USF1-205ENST00000473969 F11RQ9Y624 299 aaKnown RBP10.6□□□□□ -0.71
USF1-205ENST00000473969 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.59□□□□□ -0.71
USF1-205ENST00000473969 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 A0A0B4J2A0 478 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 ST8SIA3O43173 380 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 NDUFB6O95139 128 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 HOXA1P49639 335 aaPredicted RBP10.59□□□□□ -0.71
USF1-205ENST00000473969 INSL3P51460 131 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 SUB1P53999 127 aaKnown RBP eCLIP10.59□□□□□ -0.71
USF1-205ENST00000473969 UBE2MP61081 183 aaKnown RBP10.59□□□□□ -0.71
USF1-205ENST00000473969 ZNF846Q147U1 533 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
USF1-205ENST00000473969 REC114Q7Z4M0 266 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 OR1P1Q8NH06 330 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 LHFPL5Q8TAF8 219 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 GPR146Q96CH1 333 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 OR4C12Q96R67 309 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 CACNG5Q9UF02 275 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 SHPKQ9UHJ6 478 aa10.59□□□□□ -0.71
USF1-205ENST00000473969 LYRM1O43325 122 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 GGCTO75223 188 aaKnown RBP10.58□□□□□ -0.72
USF1-205ENST00000473969 SAP30O75446 220 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 SFT2D2O95562 160 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 IGHV3-23P01764 117 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 P0C879 139 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 SULT1A3P0DMM9 295 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 SULT1A4P0DMN0 295 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 SPCS3P61009 180 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 SUPT4H1P63272 117 aaKnown RBP10.58□□□□□ -0.72
USF1-205ENST00000473969 KLK9Q2XQG4 91 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 SPINK9Q5DT21 86 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 CLEC19AQ6UXS0 136 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 OR2C3Q8N628 320 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 VN1R17PQ8TDU5 208 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 PRR13Q9NZ81 148 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 KLK9Q9UKQ9 250 aa10.58□□□□□ -0.72
USF1-205ENST00000473969 A0A0G2JRQ6 117 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 DUXBA0A1W2PPF3 345 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 WIPF1O43516 503 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 TRBV12-3P01733 135 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 ARL3P36405 182 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 KLF5Q13887 457 aaPredicted RBP10.57□□□□□ -0.72
USF1-205ENST00000473969 MZT2BQ6NZ67 158 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 LYZL2Q7Z4W2 148 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 OR52E5Q8NH55 327 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 MISP3Q96FF7 219 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 PEMTQ9UBM1 199 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 S4R3C0 116 aa10.57□□□□□ -0.72
USF1-205ENST00000473969 NOTCH3Q9UM47 2321 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 MFSD2BA6NFX1 497 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 CEBPZOSA8MTT3 80 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 PPP5D1E7EU14 171 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 BMPR1BO00238 502 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 CLEC3BP05452 202 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 PPP1R1AQ13522 171 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 SMCO1Q147U7 214 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 FAM106AQ4KMX7 169 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 C4orf46Q504U0 113 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 ACSM6Q6P461 480 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 PLET1Q6UQ28 207 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 Q6ZRM9 215 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 OR9G4Q8NGQ1 327 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 OR1S1Q8NH92 325 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 COQ8AQ8NI60 647 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 HIPK2Q9H2X6 1198 aa10.56□□□□□ -0.72
USF1-205ENST00000473969 HEYLQ9NQ87 328 aaPredicted RBP10.56□□□□□ -0.72
USF1-205ENST00000473969 GAR1Q9NY12 217 aaKnown RBP10.56□□□□□ -0.72
USF1-205ENST00000473969 A0A1B0GU03 582 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 INS-IGF2F8WCM5 200 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 PLA2G10O15496 165 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 HLA-AP01891 365 aaKnown RBP10.55□□□□□ -0.72
USF1-205ENST00000473969 PRB2P02812 416 aaPredicted RBP10.55□□□□□ -0.72
USF1-205ENST00000473969 Q56UQ5 140 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 LRTM2Q8N967 370 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 UBAC2Q8NBM4 344 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 ZNF114Q8NC26 417 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 ZNF502Q8TBZ5 544 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 PINX1Q96BK5 328 aaKnown RBP10.55□□□□□ -0.72
USF1-205ENST00000473969 C21orf62Q9NYP8 219 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
USF1-205ENST00000473969 IGHV3-21A0A0B4J1V1 117 aa10.54□□□□□ -0.72
USF1-205ENST00000473969 FAM240BA0A1B0GVZ2 78 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms