RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SP6Q3SY56 376 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 PYDC2Q56P42 97 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 SPINK9Q5DT21 86 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 PINX1Q96BK5 328 aaKnown RBP8.78□□□□□ -1
CPNE1-222ENST00000473373 SEC22AQ96IW7 307 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 CCDC140Q96MF4 163 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 PRRT1Q99946 306 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 NDUFA4L2Q9NRX3 87 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 SLC2A8Q9NY64 477 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 SCP2D1Q9UJQ7 156 aa8.78□□□□□ -1
CPNE1-222ENST00000473373 F11RQ9Y624 299 aaKnown RBP8.78□□□□□ -1
CPNE1-222ENST00000473373 C2orf70A6NJV1 201 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 CTDSPLO15194 276 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 CD74P04233 296 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 CTSDP07339 412 aaPredicted RBP8.77□□□□□ -1.01
CPNE1-222ENST00000473373 FRMD6-AS1P0C7T7 363 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 FOLR2P14207 255 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 SNCAP37840 140 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 INPP1P49441 399 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 CD81P60033 236 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 WT1-ASQ06250 92 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 LHFPL1Q86WI0 220 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 OR4C16Q8NGL9 310 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 OR2K2Q8NGT1 345 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 VN1R17PQ8TDU5 208 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 WWC2-AS2Q96NR7 200 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 SCGB3A2Q96PL1 93 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 TP53RKQ96S44 253 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 C20orf24Q9BUV8 137 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 TMEM14BQ9NUH8 114 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 C21orf62Q9NYP8 219 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 SELENOKQ9Y6D0 94 aa8.77□□□□□ -1.01
CPNE1-222ENST00000473373 LGALS9O00182 355 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 TGOLN2O43493 480 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 B3GALNT1O75752 331 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 IGHV4-30-4P0DP06 118 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 PTBP1P26599 531 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPNE1-222ENST00000473373 IZUMO4Q1ZYL8 232 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 CD300EQ496F6 205 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-222ENST00000473373 ZNF57Q68EA5 555 aaPredicted RBP8.76□□□□□ -1.01
CPNE1-222ENST00000473373 RBPMS2Q6ZRY4 209 aaKnown RBP8.76□□□□□ -1.01
CPNE1-222ENST00000473373 GPHB5Q86YW7 130 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 OR51S1Q8NGJ8 323 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 ZNF502Q8TBZ5 544 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 CACNG8Q8WXS5 425 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 GAR1Q9NY12 217 aaKnown RBP8.76□□□□□ -1.01
CPNE1-222ENST00000473373 SIGLEC8Q9NYZ4 499 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 TECRQ9NZ01 308 aaKnown RBP8.76□□□□□ -1.01
CPNE1-222ENST00000473373 KCNIP3Q9Y2W7 256 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 UFC1Q9Y3C8 167 aa8.76□□□□□ -1.01
CPNE1-222ENST00000473373 IZUMO1RA6ND01 250 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 DBX1A6NMT0 343 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 NUPL2O15504 423 aaKnown RBP8.75□□□□□ -1.01
CPNE1-222ENST00000473373 YIF1AO95070 293 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 IGKV1-39P01597 117 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 IGKV1D-39P04432 117 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 OR5AC1P0C628 307 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 CBLN1P23435 193 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 TNFSF8P32971 234 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 SUB1P53999 127 aaKnown RBP eCLIP8.75□□□□□ -1.011e-12■■■■□ 22.8
CPNE1-222ENST00000473373 AP3S2P59780 193 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 HSPE1P61604 102 aaKnown RBP8.75□□□□□ -1.01
CPNE1-222ENST00000473373 PRCDQ00LT1 54 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 IL34Q6ZMJ4 242 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 SLC16A13Q7RTY0 426 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 CADM3Q8N126 398 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 UXS1Q8NBZ7 420 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 BSCL2Q96G97 398 aaPredicted RBP8.75□□□□□ -1.01
CPNE1-222ENST00000473373 SLIRPQ9GZT3 109 aaKnown RBP8.75□□□□□ -1.01
CPNE1-222ENST00000473373 DNAH9Q9NYC9 4486 aa8.75□□□□□ -1.01
CPNE1-222ENST00000473373 ANKRD20A5PA0PJZ0 165 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 ST8SIA3O43173 380 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 GNG7O60262 68 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 SCGB2A1O75556 95 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 SCAF4O95104 1147 aaKnown RBP8.74□□□□□ -1.01
CPNE1-222ENST00000473373 AKR1C4P17516 323 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 MFAP4P55083 255 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 DHODHQ02127 395 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 SURF2Q15527 256 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-222ENST00000473373 TM4SF20Q53R12 229 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 SPSB3Q6PJ21 355 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 BTNL8Q6UX41 500 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 TOMM5Q8N4H5 51 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 OR2C3Q8N628 320 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 OR52B4Q8NGK2 314 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 SCARB1Q8WTV0 552 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 NEURL2Q9BR09 285 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 THAP7Q9BT49 309 aaPredicted RBP8.74□□□□□ -1.01
CPNE1-222ENST00000473373 NAA60Q9H7X0 242 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 CEPT1Q9Y6K0 416 aa8.74□□□□□ -1.01
CPNE1-222ENST00000473373 IGHV3OR16-8A0A075B7F1 116 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 GSTZ1O43708 216 aaPredicted RBP8.73□□□□□ -1.01
CPNE1-222ENST00000473373 IGKV1-5P01602 117 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 IGHV3-48P01763 117 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 ANXA3P12429 323 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 EDN2P20800 178 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 UCP1P25874 307 aa8.73□□□□□ -1.01
CPNE1-222ENST00000473373 ETV6P41212 452 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms