RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 J3QR89 54 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 SAP18O00422 153 aaKnown RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 ISLRO14498 428 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 ZNF780AO75290 641 aaPredicted RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 CXorf1O96002 111 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 SCTP09683 121 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 RPS4Y1P22090 263 aaKnown RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 PPIBP23284 216 aaKnown RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 THBS3P49746 956 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 SYNJ2BPP57105 145 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 HERVK_113P63121 156 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 SRSF4Q08170 494 aaKnown RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 PRSS54Q6PEW0 395 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 Q6ZRP5 223 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 NFE4Q86UQ8 179 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 LYG1Q8N1E2 194 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 TMEM75Q8N9X5 138 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 NUP37Q8NFH4 326 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 NUP35Q8NFH5 326 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 ZNF418Q8TF45 676 aaPredicted RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 CMBLQ96DG6 245 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 PHYHIPLQ96FC7 376 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 IGF2BP2-AS1Q96M15 143 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 TRIB3Q96RU7 358 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 HSD17B10Q99714 261 aaKnown RBP4.54□□□□□ -1.68
RTF1-203ENST00000473214 IFI27L2Q9H2X8 130 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 EFCAB1Q9HAE3 211 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 CXorf21Q9HAI6 301 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 PDFQ9HBH1 243 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 FAM49BQ9NUQ9 324 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 DNAJC12Q9UKB3 198 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 CYSLTR1Q9Y271 337 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 NEUROG3Q9Y4Z2 214 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 COX11Q9Y6N1 276 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 LAMA5O15230 3695 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 FREM2Q5SZK8 3169 aa4.54□□□□□ -1.68
RTF1-203ENST00000473214 CELSR3Q9NYQ7 3312 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 COL4A2P08572 1712 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 A0A087WW49 117 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 IGHV7-81A0A0B4J1V7 117 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 TRAV5A0A0B4J249 113 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 DHRS12A0PJE2 317 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 KLLNB2CW77 178 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 M0R1X1 148 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 UPK1AO00322 258 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 OPN1SWP03999 348 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 IGHV3-43DP0DP04 118 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 NOVP48745 357 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 PSMB3P49720 205 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 PPP1CAP62136 330 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 HBA1P69905 142 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 CYCSP99999 105 aaKnown RBP4.53□□□□□ -1.68
RTF1-203ENST00000473214 CLLU1OSQ5K130 101 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 DNAJC24Q6P3W2 148 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 LINC00596Q86U02 117 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 NKAPP1Q8N9T2 125 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 OR5H6Q8NGV6 325 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 OR52P1PQ8NH57 321 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 OR51H1Q8NH63 302 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 ZNF519Q8TB69 540 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 FRZBQ92765 325 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 HIST1H2BAQ96A08 127 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 KCNS1Q96KK3 526 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 AP1S3Q96PC3 154 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 PSMG3Q9BT73 122 aaPredicted RBP4.53□□□□□ -1.68
RTF1-203ENST00000473214 SLC25A2Q9BXI2 301 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 OCR1Q9BZK8 76 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 ZNF436Q9C0F3 470 aaPredicted RBP4.53□□□□□ -1.68
RTF1-203ENST00000473214 ZBP1Q9H171 429 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 JPT2Q9H910 190 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 DPM3Q9P2X0 92 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 RPUSD1Q9UJJ7 312 aaKnown RBP4.53□□□□□ -1.68
RTF1-203ENST00000473214 HS3ST2Q9Y278 367 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 CKAP5Q14008 2032 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 HECTD1Q9ULT8 2610 aa4.53□□□□□ -1.68
RTF1-203ENST00000473214 GREB1Q4ZG55 1949 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 TRBV19A0A075B6N1 114 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 IGKV1-27A0A075B6S5 117 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 TRAV38-1A0A0B4J264 116 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 TRAV4A0A0B4J268 109 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 CD300LBA8K4G0 201 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 NTN3O00634 580 aaPredicted RBP4.52□□□□□ -1.69
RTF1-203ENST00000473214 BCL2L11O43521 198 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 SRSF10O75494 262 aaKnown RBP4.52□□□□□ -1.69
RTF1-203ENST00000473214 HLA-DQB2P05538 268 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 CTSEP14091 401 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 GNA12Q03113 381 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 LOXL1Q08397 574 aaPredicted RBP4.52□□□□□ -1.69
RTF1-203ENST00000473214 LRRC10Q5BKY1 277 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 NCMAPQ5T1S8 102 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 STPG1Q5TH74 334 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 ZNF773Q6PK81 442 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 SNX29P2Q8IUI4 249 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 C4orf33Q8N1A6 199 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 VN1R17PQ8TDU5 208 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 DDB2Q92466 427 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 SLAMF6Q96DU3 332 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 PRADC1Q9BSG0 188 aa4.52□□□□□ -1.69
RTF1-203ENST00000473214 ZNF471Q9BX82 626 aaPredicted RBP4.52□□□□□ -1.69
RTF1-203ENST00000473214 OR2J1Q9GZK6 312 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms