RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 HOXA1P49639 335 aaPredicted RBP11.39□□□□□ -0.59
SMARCD3-207ENST00000472103 IAH1Q2TAA2 248 aaPredicted RBP11.39□□□□□ -0.59
SMARCD3-207ENST00000472103 COMMD1Q8N668 190 aa11.39□□□□□ -0.59
SMARCD3-207ENST00000472103 P2RX4Q99571 388 aa11.39□□□□□ -0.59
SMARCD3-207ENST00000472103 MAGT1Q9H0U3 335 aa11.39□□□□□ -0.59
SMARCD3-207ENST00000472103 GNB4Q9HAV0 340 aa11.39□□□□□ -0.59
SMARCD3-207ENST00000472103 IGLV11-55A0A075B6I3 123 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 TRBV9A0A0B4J1U6 114 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 C5orf51A6NDU8 294 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 INS-IGF2F8WCM5 200 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 OR2J3O76001 311 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 TRGV3P03979 118 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 RNASE2P10153 161 aaKnown RBP11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 TPPP2P59282 170 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 RPL23AP62750 156 aaKnown RBP11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 ID3Q02535 119 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 IL15RAQ13261 267 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 KLK9Q2XQG4 91 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 KHDC1LQ5JSQ8 128 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 ZNF491Q8N8L2 437 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 GSKIPQ9P0R6 139 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 KLK9Q9UKQ9 250 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 F11RQ9Y624 299 aaKnown RBP11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 COL6A5A8TX70 2615 aa11.38□□□□□ -0.59
SMARCD3-207ENST00000472103 H3BUA1 57 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 SSNA1O43805 119 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 NDUFB8O95169 186 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 SCGB1D2O95969 90 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 IAPPP10997 89 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 POLR2GP62487 172 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 FCN2Q15485 313 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 NSUN5P1Q3KNT7 163 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 GSG1LQ6UXU4 331 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 HSD17B13Q7Z5P4 300 aaPredicted RBP11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 TMEM170AQ8WVE7 144 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 C2orf50Q96LR7 162 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 MGAT4CQ9UBM8 478 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 S4R3C0 116 aa11.37□□□□□ -0.59
SMARCD3-207ENST00000472103 TENM1Q9UKZ4 2725 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 FAM90A26D6RGX4 464 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 BRI3O95415 125 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 IGHV3-11P01762 117 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 MBPP02686 304 aaPredicted RBP11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 CXCL3P19876 107 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 NKX2-1P43699 371 aaPredicted RBP11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 H2BFSP57053 126 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 RHOGP84095 191 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 SLC25A24Q6NUK1 477 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 TMEM65Q6PI78 240 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 SHISA2Q6UWI4 295 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 ZNF114Q8NC26 417 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 OR11H7Q8NGC8 314 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 DTD1Q8TEA8 209 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 OR5B12Q96R08 314 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 ENY2Q9NPA8 101 aa11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 TSSC4Q9Y5U2 329 aaPredicted RBP11.36□□□□□ -0.59
SMARCD3-207ENST00000472103 IGHV3-21A0A0B4J1V1 117 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 WRBO00258 174 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 SYNGR2O43760 224 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 TMEM50AO95807 157 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 IGHV3-23P01764 117 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 DEFA4P12838 97 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 KLHL30-AS1Q8NEE0 82 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 SLA2Q9H6Q3 261 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 HEYLQ9NQ87 328 aaPredicted RBP11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 FBXL7Q9UJT9 491 aa11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 RCL1Q9Y2P8 373 aaKnown RBP11.35□□□□□ -0.59
SMARCD3-207ENST00000472103 MFSD2BA6NFX1 497 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 K7EPK0 472 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 CDX1P47902 265 aaPredicted RBP11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 PAX9P55771 341 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 DEFB136Q30KP8 78 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 OR1P1Q8NH06 330 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 UBE2E2Q96LR5 201 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 C11orf1Q9H5F2 150 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 ZFP57Q9NU63 452 aa11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
SMARCD3-207ENST00000472103 C15orf62A8K5M9 175 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 I3L521 148 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 K7EIM0 57 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 SSSCA1O60232 199 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 RAB32Q13637 225 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 MLANAQ16655 118 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 Q6ZNX1 250 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 SLC24A4Q8NFF2 622 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 SPATA3Q8NHX4 192 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 MISP3Q96FF7 219 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 MED28Q9H204 178 aa11.33□□□□□ -0.6
SMARCD3-207ENST00000472103 STAB1Q9NY15 2570 aa11.32□□□□□ -0.6
SMARCD3-207ENST00000472103 FAM223BA6NKX1 122 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms