RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 SCAND1P57086 179 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 HERV-K104P61576 105 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 MLANAQ16655 118 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 FAM209BQ5JX69 171 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 UBE2NLQ5JXB2 153 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 TMEM69Q5SWH9 247 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 UBAC2Q8NBM4 344 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 TSPAN14Q8NG11 270 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 OR1L8Q8NGR8 309 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 TMEM190Q8WZ59 177 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 SLC25A46Q96AG3 418 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 SEC22AQ96IW7 307 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 RNF2Q99496 336 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 C20orf24Q9BUV8 137 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 FUNDC2Q9BWH2 189 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 Q9H521 79 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 IFT46Q9NQC8 304 aa5.98□□□□□ -1.45
USP48-207ENST00000471752 MRPL36Q9P0J6 103 aaKnown RBP5.98□□□□□ -1.45
USP48-207ENST00000471752 DYNC1H1Q14204 4646 aaKnown RBP5.97□□□□□ -1.45
USP48-207ENST00000471752 IGKV3-7A0A075B6H7 116 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 IGHV3-66A0A0C4DH42 116 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 I3L2K1 104 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 GPR31O00270 319 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 IGKV1-5P01602 117 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 CTSDP07339 412 aaPredicted RBP5.97□□□□□ -1.45
USP48-207ENST00000471752 FCGR2BP31994 310 aaPredicted RBP5.97□□□□□ -1.45
USP48-207ENST00000471752 CBX5P45973 191 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 TFPI2P48307 235 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 CATR1Q13166 79 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 PMS2P11Q13670 270 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 GSG1LQ6UXU4 331 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 TBC1D26Q86UD7 250 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 LAX1Q8IWV1 398 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 OR4D10Q8NGI6 311 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 OR5H2Q8NGV7 314 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 OR5B3Q8NH48 314 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 VN1R17PQ8TDU5 208 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 GGTLC1Q9BX51 225 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 MRPL27Q9P0M9 148 aaKnown RBP5.97□□□□□ -1.45
USP48-207ENST00000471752 KLK11Q9UBX7 282 aa5.97□□□□□ -1.45
USP48-207ENST00000471752 F11RQ9Y624 299 aaKnown RBP5.97□□□□□ -1.45
USP48-207ENST00000471752 RYR1P21817 5038 aa5.96□□□□□ -1.45
USP48-207ENST00000471752 KIAA1109Q2LD37 5005 aa5.96□□□□□ -1.45
USP48-207ENST00000471752 LOC102724200A0A096LPH7 203 aaPredicted RBP5.96□□□□□ -1.46
USP48-207ENST00000471752 A0A0B4J293 547 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 A0A0G2JRQ6 117 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 DHFRP00374 187 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 DEFB135Q30KP9 77 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 SP6Q3SY56 376 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 Q6ZRM9 215 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 RBPMS2Q6ZRY4 209 aaKnown RBP5.96□□□□□ -1.46
USP48-207ENST00000471752 SLC16A13Q7RTY0 426 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 GBGT1Q8N5D6 347 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 FAM24BQ8N5W8 94 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 OR2C3Q8N628 320 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 OR1L6Q8NGR2 347 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 OR6F1Q8NGZ6 308 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 OR52I2Q8NH67 350 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 IL17DQ8TAD2 202 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 MRGPRFQ96AM1 343 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 CXorf58Q96LI9 332 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 ABHD1Q96SE0 405 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 C5orf66Q9H5L9 145 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 TMEM14BQ9NUH8 114 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 C21orf62Q9NYP8 219 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 COMMD9Q9P000 198 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 SMPXQ9UHP9 88 aa5.96□□□□□ -1.46
USP48-207ENST00000471752 DNAH11Q96DT5 4516 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 A0A087WXM4 84 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 C15orf61A6NNL5 157 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 CHEK1O14757 476 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 TSPAN4O14817 238 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 MT-CO2P00403 227 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 CD3DP04234 171 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 P0C879 139 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 SMIM18P0DKX4 95 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 CTF1Q16619 201 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 Q56UQ5 140 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 LYG2Q86SG7 212 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 LSM10Q969L4 123 aaKnown RBP5.95□□□□□ -1.46
USP48-207ENST00000471752 MISP3Q96FF7 219 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 TP53RKQ96S44 253 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 RHPN1-AS1Q9BWJ2 59 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 MIXL1Q9H2W2 232 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 UFC1Q9Y3C8 167 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 PKD1P98161 4303 aa5.95□□□□□ -1.46
USP48-207ENST00000471752 TRAV25A0A0B4J276 109 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 IGHV7-4-1A0A0J9YVY3 117 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 A0A1B0GU03 582 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 NDUFA4O00483 81 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 DEFB4AO15263 64 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 SPRY2O43597 315 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 YIF1AO95070 293 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 APOA1P02647 267 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 ETV6P41212 452 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 PPP5CP53041 499 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 ELLP55199 621 aaPredicted RBP5.94□□□□□ -1.46
USP48-207ENST00000471752 TAS2R46P59540 309 aa5.94□□□□□ -1.46
USP48-207ENST00000471752 ERVK-16P61578 105 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms