RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 OR4C12Q96R67 309 aa15.06■□□□□ 0
PSPC1-203ENST00000471658 RAB40CQ96S21 281 aa15.06■□□□□ 0
PSPC1-203ENST00000471658 SRSF8Q9BRL6 282 aaKnown RBP15.06■□□□□ 0
PSPC1-203ENST00000471658 WNT10AQ9GZT5 417 aa15.06■□□□□ 0
PSPC1-203ENST00000471658 ZFP57Q9NU63 452 aa15.06■□□□□ 0
PSPC1-203ENST00000471658 FAM24AA6NFZ4 105 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 SOX15O60248 233 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 PFDN1O60925 122 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 RNASE2P10153 161 aaKnown RBP15.05■□□□□ -0
PSPC1-203ENST00000471658 MFAP2P55001 183 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 TMEM267Q0VDI3 215 aaPredicted RBP15.05■□□□□ -0
PSPC1-203ENST00000471658 ZNF329Q86UD4 541 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 PRIMA1Q86XR5 153 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 OR2T6Q8NHC8 308 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 THAP6Q8TBB0 222 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 DMRT1Q9Y5R6 373 aa15.05■□□□□ -0
PSPC1-203ENST00000471658 C15orf62A8K5M9 175 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 FBXO24O75426 580 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 IFNA10P01566 189 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 CRYGCP07315 174 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 LYL1P12980 280 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 PPIFP30405 207 aaKnown RBP15.04■□□□□ -0
PSPC1-203ENST00000471658 FGL1Q08830 312 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 DCUN1D4Q92564 292 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 CIB3Q96Q77 187 aaPredicted RBP15.04■□□□□ -0
PSPC1-203ENST00000471658 PAIP2BQ9ULR5 123 aaKnown RBP15.04■□□□□ -0
PSPC1-203ENST00000471658 JMJD1CQ15652 2540 aa15.04■□□□□ -0
PSPC1-203ENST00000471658 FXYD6-FXYD2A0A087WZ82 144 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 NPIPB5A8MRT5 1133 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 E5RGE8 158 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 PVALBP20472 110 aaPredicted RBP15.03■□□□□ -0
PSPC1-203ENST00000471658 SNCAP37840 140 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 CAV2P51636 162 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 BSXQ3C1V8 233 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 HSD17B13Q7Z5P4 300 aaPredicted RBP15.03■□□□□ -0
PSPC1-203ENST00000471658 SLC24A4Q8NFF2 622 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 LINC01006Q8NI28 216 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 FAM110DQ8TAY7 271 aaPredicted RBP15.03■□□□□ -0
PSPC1-203ENST00000471658 C16orf95Q9H693 158 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 SLC25A4P12235 298 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 HTR2BP41595 481 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 TAS2R30P59541 319 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 RPL23AP62750 156 aaKnown RBP15.03■□□□□ -0
PSPC1-203ENST00000471658 CFHR3Q02985 330 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 STRAPQ9Y3F4 350 aaKnown RBP15.03■□□□□ -0
PSPC1-203ENST00000471658 F11RQ9Y624 299 aaKnown RBP15.03■□□□□ -0
PSPC1-203ENST00000471658 U3KQ87 197 aa15.03■□□□□ -0
PSPC1-203ENST00000471658 IGSF23A1L1A6 192 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 NDUFA7O95182 113 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 PET100P0DJ07 73 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 NPY1RP25929 384 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 DEFA5Q01523 94 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 MRPL41Q8IXM3 137 aaKnown RBP15.02□□□□□ -0.01
PSPC1-203ENST00000471658 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.02□□□□□ -0.01
PSPC1-203ENST00000471658 TMEM68Q96MH6 324 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 MS4A10Q96PG2 267 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 FANCD2OSQ96PS1 177 aa15.02□□□□□ -0.01
PSPC1-203ENST00000471658 TSC22D2O75157 780 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 METTL15P1P0C7V9 234 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 DEFA4P12838 97 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 P2RY1P47900 373 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 SLC25A24Q6NUK1 477 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 LCNL1Q6ZST4 164 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 BSCL2Q96G97 398 aaPredicted RBP15.01□□□□□ -0.01
PSPC1-203ENST00000471658 ZNF355PQ9NSJ1 428 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 LYRM2Q9NU23 88 aaPredicted RBP15.01□□□□□ -0.01
PSPC1-203ENST00000471658 ZNF580Q9UK33 172 aa15.01□□□□□ -0.01
PSPC1-203ENST00000471658 MDKP21741 143 aaPredicted RBP15□□□□□ -0.01
PSPC1-203ENST00000471658 ARL16Q0P5N6 197 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 MLANAQ16655 118 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 C2orf83Q53S99 150 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 TMEM14EPQ6UXP3 125 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 CENPVQ7Z7K6 275 aaPredicted RBP15□□□□□ -0.01
PSPC1-203ENST00000471658 ZNF546Q86UE3 836 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 HAPLN4Q86UW8 402 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 TMEM252Q8N6L7 170 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 ZNF114Q8NC26 417 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 OR1P1Q8NH06 330 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 SETD2Q9BYW2 2564 aaPredicted RBP15□□□□□ -0.01
PSPC1-203ENST00000471658 C2CD3Q4AC94 2353 aa15□□□□□ -0.01
PSPC1-203ENST00000471658 IGHV3-21A0A0B4J1V1 117 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 CST7O76096 145 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 C1QBP02746 253 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 HKR1P10072 659 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 MISP3Q96FF7 219 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 KLK15Q9H2R5 256 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 PSMB11A5LHX3 300 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 PMS2P5A8MQ11 134 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 LY86O95711 162 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 IGLV1-40P01703 118 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 IFNA4P05014 189 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 RPL12P30050 165 aaKnown RBP14.99□□□□□ -0.01
PSPC1-203ENST00000471658 SUB1P53999 127 aaKnown RBP eCLIP14.99□□□□□ -0.01
PSPC1-203ENST00000471658 NHLH2Q02577 135 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 PVRIGQ6DKI7 326 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 OR8G2PQ6IF36 304 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 ETV3LQ6ZN32 361 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 LURAP1LQ8IV03 231 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 TNFSF18Q9UNG2 199 aa14.99□□□□□ -0.01
PSPC1-203ENST00000471658 IGLV11-55A0A075B6I3 123 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms