RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 Q6ZRM9 215 aa13.66□□□□□ -0.22
VPS72-204ENST00000471423 IFNA17P01571 189 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 SRPXP78539 464 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 KLK9Q2XQG4 91 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 ANKRD55Q3KP44 614 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 LYZL2Q7Z4W2 148 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 LGI3Q8N145 548 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 GPR146Q96CH1 333 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 PDCD10Q9BUL8 212 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 RANGRFQ9HD47 186 aaPredicted RBP13.65□□□□□ -0.22
VPS72-204ENST00000471423 PEF1Q9UBV8 284 aaKnown RBP13.65□□□□□ -0.22
VPS72-204ENST00000471423 CACNG5Q9UF02 275 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 KLK9Q9UKQ9 250 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 F11RQ9Y624 299 aaKnown RBP13.65□□□□□ -0.22
VPS72-204ENST00000471423 S4R3C0 116 aa13.65□□□□□ -0.22
VPS72-204ENST00000471423 A0A0B4J2A0 478 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 SFT2D2O95562 160 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 DUS4LO95620 317 aaKnown RBP13.64□□□□□ -0.23
VPS72-204ENST00000471423 IGHV3-23P01764 117 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 HOXD3P31249 432 aaPredicted RBP13.64□□□□□ -0.23
VPS72-204ENST00000471423 BEAN1Q3B7T3 259 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 DCUN1D4Q92564 292 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 DLX4Q92988 240 aaPredicted RBP13.64□□□□□ -0.23
VPS72-204ENST00000471423 MCRIP2Q9BUT9 160 aaKnown RBP13.64□□□□□ -0.23
VPS72-204ENST00000471423 SHPKQ9UHJ6 478 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 MEGF8Q7Z7M0 2845 aa13.64□□□□□ -0.23
VPS72-204ENST00000471423 MFSD2BA6NFX1 497 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 CYB5BO43169 146 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 HOXA1P49639 335 aaPredicted RBP13.63□□□□□ -0.23
VPS72-204ENST00000471423 MFAP2P55001 183 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 UBE2MP61081 183 aaKnown RBP13.63□□□□□ -0.23
VPS72-204ENST00000471423 NMSQ5H8A3 153 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 SLC25A24Q6NUK1 477 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 OR2C3Q8N628 320 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 CCDC140Q96MF4 163 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.63□□□□□ -0.23
VPS72-204ENST00000471423 TBC1D24Q9ULP9 559 aa13.63□□□□□ -0.23
VPS72-204ENST00000471423 DNAH3Q8TD57 4116 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
VPS72-204ENST00000471423 OVOL1O14753 267 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 UPK1BO75841 260 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 HLA-AP01891 365 aaKnown RBP13.62□□□□□ -0.23
VPS72-204ENST00000471423 ANXA7P20073 488 aaKnown RBP13.62□□□□□ -0.23
VPS72-204ENST00000471423 ZP3P21754 424 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 AARDQ4LEZ3 155 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 KPRPQ5T749 579 aaPredicted RBP13.62□□□□□ -0.23
VPS72-204ENST00000471423 EEF1AKMT3Q96AZ1 226 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 C20orf85Q9H1P6 137 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 THYN1Q9P016 225 aa13.62□□□□□ -0.23
VPS72-204ENST00000471423 C9orf170A2RU37 121 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 SEC14L6B5MCN3 397 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 BMPR1BO00238 502 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 NXPH3O95157 252 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 OR4E1P0C645 316 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 SULT1A3P0DMM9 295 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 SULT1A4P0DMN0 295 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 ERHP84090 104 aaKnown RBP13.61□□□□□ -0.23
VPS72-204ENST00000471423 DEFA6Q01524 100 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 ZNF114Q8NC26 417 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 OR1P1Q8NH06 330 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 GPR61Q9BZJ8 451 aa13.61□□□□□ -0.23
VPS72-204ENST00000471423 IGHV3-21A0A0B4J1V1 117 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 PIGBOS1A0A0B4J2F0 54 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 DUXBA0A1W2PPF3 345 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 PPP5D1E7EU14 171 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 TCRBP04435 133 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 SPCS3P61009 180 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 DHRS2Q13268 280 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 ASAH1Q13510 395 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 SMCO1Q147U7 214 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 RPEL1Q2QD12 228 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 C4orf46Q504U0 113 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 OR1L6Q8NGR2 347 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 OR52E5Q8NH55 327 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 ENY2Q9NPA8 101 aa13.6□□□□□ -0.23
VPS72-204ENST00000471423 TRAV6A0A075B6T7 132 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 INS-IGF2F8WCM5 200 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 IFITM3Q01628 133 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 FAM209BQ5JX69 171 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 MZT2BQ6NZ67 158 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 CLEC19AQ6UXS0 136 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 LYG2Q86SG7 212 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 ZNF502Q8TBZ5 544 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 VN1R17PQ8TDU5 208 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 MISP3Q96FF7 219 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 NUDT15Q9NV35 164 aa13.59□□□□□ -0.23
VPS72-204ENST00000471423 FAM240BA0A1B0GVZ2 78 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 CEBPZOSA8MTT3 80 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 K7EIM0 57 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 PRB2P02812 416 aaPredicted RBP13.58□□□□□ -0.24
VPS72-204ENST00000471423 GPR183P32249 361 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 ARL3P36405 182 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 SNCAP37840 140 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 SYNJ2BPP57105 145 aa13.58□□□□□ -0.24
VPS72-204ENST00000471423 KLF5Q13887 457 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms