RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 HCP5Q6MZN7 132 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 AGTRAPQ6RW13 159 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 PSORS1C2Q9UIG4 136 aa3.32□□□□□ -1.88
SMC5-202ENST00000471372 CLDN25C9JDP6 229 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 IFNA1P01562 189 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 SULT1A3P0DMM9 295 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 SULT1A4P0DMN0 295 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 CSRP1P21291 193 aaKnown RBP3.31□□□□□ -1.88
SMC5-202ENST00000471372 PPIBP23284 216 aaKnown RBP3.31□□□□□ -1.88
SMC5-202ENST00000471372 CRYBA4P53673 196 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 TAS2R41P59536 307 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 TPI1P60174 286 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 TAF9Q16594 264 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 SLC35E3Q7Z769 313 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 SMIM20Q8N5G0 67 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 PARVBQ9HBI1 364 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 V9GYQ6 96 aa3.31□□□□□ -1.88
SMC5-202ENST00000471372 MUC21A0A0G2JKD1 596 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 MUC21A0A140T8X8 626 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 BUB1B-PAK6H3BSN5 160 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 C1QBP02746 253 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 ZNF80P51504 273 aaPredicted RBP3.3□□□□□ -1.88
SMC5-202ENST00000471372 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 TRIQKQ629K1 86 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 OR5J2Q8NH18 312 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 FAM172AQ8WUF8 416 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 RASSF5Q8WWW0 418 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 TRABDQ9H4I3 376 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 HHLA3Q9XRX5 114 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 MAST2Q6P0Q8 1798 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 WDR90Q96KV7 1748 aa3.3□□□□□ -1.88
SMC5-202ENST00000471372 NEO1Q92859 1461 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 PPBPP02775 128 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 HIST1H4AP62805 103 aaKnown RBP3.29□□□□□ -1.88
SMC5-202ENST00000471372 GNG3P63215 75 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 Q6Q795 121 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 MED29Q9NX70 200 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 SS18L2Q9UHA2 77 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 PYCARDQ9ULZ3 195 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 TIMM9Q9Y5J7 89 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 NOTCH2Q04721 2471 aa3.29□□□□□ -1.88
SMC5-202ENST00000471372 SLX4Q8IY92 1834 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 PLXNB1O43157 2135 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 TRAV7A0A075B6U4 112 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 TRAV38-1A0A0B4J264 116 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 TRAV41A0A0B4J266 112 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 IRGMA1A4Y4 181 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 TRAPPC2LH3BP13 241 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 OR2J2O76002 312 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 IFNA10P01566 189 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 PSMB8P28062 276 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 G6PCP35575 357 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 DR1Q01658 176 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 TNFRSF9Q07011 255 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 LYZL1Q6UWQ5 148 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 BPIFA4PQ86YQ2 179 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 OR52R1Q8NGF1 315 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 GPR146Q96CH1 333 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 GINS3Q9BRX5 216 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 TVP23BQ9NYZ1 205 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 UFC1Q9Y3C8 167 aa3.28□□□□□ -1.88
SMC5-202ENST00000471372 DENND4BO75064 1496 aaPredicted RBP3.28□□□□□ -1.88
SMC5-202ENST00000471372 DOCK6Q96HP0 2047 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 IGKV3D-11A0A0A0MRZ8 115 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 FNDC10F2Z333 226 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 C3orf84H3BNL1 204 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 MSMBP08118 114 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 RPS4Y1P22090 263 aaKnown RBP3.27□□□□□ -1.89
SMC5-202ENST00000471372 CDC42P60953 191 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 SS18Q15532 418 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 DYNAPQ8N1N2 210 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 OR13C6PQ8NH95 151 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 MIA2Q96PC5 1412 aa3.27□□□□□ -1.89
SMC5-202ENST00000471372 DOCK3Q8IZD9 2030 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 SLIT2O94813 1529 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 SCN10AQ9Y5Y9 1956 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 TRAV4A0A0B4J268 109 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 RFPL4AA6NLU0 287 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 RFPL4AL1F8VTS6 287 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 H7C2G1 150 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 CIAO1O76071 339 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 LGALS3P17931 250 aaKnown RBP3.26□□□□□ -1.89
SMC5-202ENST00000471372 ATP5G3P48201 142 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 RHOBP62745 196 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 SUPT4H1P63272 117 aaKnown RBP3.26□□□□□ -1.89
SMC5-202ENST00000471372 PABPC1L2AQ5JQF8 200 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 SPANXN3Q5MJ09 141 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 BRD3OSQ6XYD6 125 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 TCF24Q7RTU0 167 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 Q8NDZ9 215 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 TERB2Q8NHR7 220 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 DNAJC9Q8WXX5 260 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 Q9BRP9 147 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 MRPL40Q9NQ50 206 aaKnown RBP3.26□□□□□ -1.89
SMC5-202ENST00000471372 PRNDQ9UKY0 176 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 SDK2Q58EX2 2172 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 MYO16Q9Y6X6 1858 aa3.26□□□□□ -1.89
SMC5-202ENST00000471372 SCN9AQ15858 1988 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 A0A1B0GVG6 124 aa3.25□□□□□ -1.89
SMC5-202ENST00000471372 CBR1P16152 277 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms