RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 OR2T10Q8NGZ9 312 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 SAT2Q96F10 170 aaPredicted RBP4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 OR4C12Q96R67 309 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 TMEM147Q9BVK8 224 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 NDUFA4L2Q9NRX3 87 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 MED9Q9NWA0 146 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 HILPDAQ9Y5L2 63 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 AUP1Q9Y679 476 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 YLPM1P49750 1951 aaKnown RBP4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 IGSF10Q6WRI0 2623 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 MALRD1Q5VYJ5 2156 aa4.87□□□□□ -1.63
SMNDC1-204ENST00000471297 SPTBN1Q01082 2364 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 A0A096LNT2 108 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 CENPVL3A0A0U1RRI6 287 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 RPS10-NUDT3A0A1W2PQS6 291 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 A0A1W2PRD5 423 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 A0A1W2PRF3 423 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 A0A1W2PRM7 423 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 C15orf62A8K5M9 175 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 UMAD1C9J7I0 102 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 FNDC10F2Z333 226 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 J3QLI3 93 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 RRHO14718 337 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 NPFFO15130 113 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 ZZEF1O43149 2961 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SLC25A17O43808 307 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 TSPAN9O75954 239 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 ACTL6BO94805 426 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 NDUFA3O95167 84 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 VENTXO95231 258 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SNRNP70P08621 437 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 NMBP08949 121 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 FAM157CP0CG43 387 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 FAM106CPP0CH98 169 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 S100A1P23297 94 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 NPY1RP25929 384 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 BRS3P32247 399 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 COMPP49747 757 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 BPIFB3P59826 476 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 KRTAP10-9P60411 292 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 PRB3Q04118 309 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SLC38A11Q08AI6 406 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 ARL16Q0P5N6 197 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SSX2Q16385 188 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 PRSS8Q16651 343 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 VWC2Q2TAL6 325 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 CD300EQ496F6 205 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 C2orf83Q53S99 150 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SPINK9Q5DT21 86 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 LDLRAD2Q5SZI1 272 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 OR8G2PQ6IF36 304 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SLC25A24Q6NUK1 477 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 HSD17B13Q7Z5P4 300 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 HAPLN4Q86UW8 402 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 PPP1R27Q86WC6 154 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SLC7A5P1Q8MH63 180 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 HSD17B11Q8NBQ5 300 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SLC24A4Q8NFF2 622 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 TMED6Q8WW62 240 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SRSF8Q9BRL6 282 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 PSMG3Q9BT73 122 aaPredicted RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 HINT2Q9BX68 163 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 C1RLQ9NZP8 487 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 KIAA1456Q9P272 454 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 METTL1Q9UBP6 276 aaKnown RBP4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 SIGLEC9Q9Y336 463 aa4.86□□□□□ -1.63
SMNDC1-204ENST00000471297 IGHV1-69DA0A0B4J2H0 117 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 ZNF705EA8MWA4 302 aaPredicted RBP4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 TRIM77I1YAP6 450 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 NBR2O15453 112 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 SOX15O60248 233 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 ATP6V1G1O75348 118 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 MPDU1O75352 247 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 CA2P00918 260 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 IGKV1D-33P01593 117 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 IGKV1-33P01594 117 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 IGHV1-69P01742 117 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 IFNA4P05014 189 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 ATP6V0CP27449 155 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 SNCAP37840 140 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 RPL27AP46776 148 aaKnown RBP4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 DLK1P80370 383 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 SERF2P84101 59 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 HES1Q14469 280 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 PLGLAQ15195 96 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 DPPA3Q6W0C5 159 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 CENPVQ7Z7K6 275 aaPredicted RBP4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 OR2G3Q8NGZ4 309 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 RITA1Q96K30 269 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 REG4Q9BYZ8 158 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 WDR61Q9GZS3 305 aaKnown RBP4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 ZNF430Q9H8G1 570 aaPredicted RBP4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 NPVFQ9HCQ7 196 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 UQCC1Q9NVA1 299 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 TIMM9Q9Y5J7 89 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 DOPEY1Q5JWR5 2465 aa4.85□□□□□ -1.63
SMNDC1-204ENST00000471297 DOCK11Q5JSL3 2073 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 PRSS46E5RG02 174 aa4.84□□□□□ -1.63
SMNDC1-204ENST00000471297 C17orf112F2Z3M2 114 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms