RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 OSTCQ9NRP0 149 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 MRPL16Q9NX20 251 aaKnown RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 TRAPPC2LQ9UL33 140 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 TMEM131Q92545 1883 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 TRGV10A0A0A0MS01 117 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 IGHV3-15A0A0B4J1V0 119 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 CHEK1O14757 476 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 ZNHIT1O43257 154 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 MT-CO3P00414 261 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 CA6P23280 308 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 FCGR2BP31994 310 aaPredicted RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 RAC3P60763 192 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 ZNF585BQ52M93 769 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 FAM162BQ5T6X4 162 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 SLC23A3Q6PIS1 610 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 C2orf91Q6ZV80 131 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 H2BFWTQ7Z2G1 175 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 CPAMD8Q8IZJ3 1885 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 TEX45Q8NA69 505 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 OR52E5Q8NH55 327 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 ARPC1AQ92747 370 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 C10orf35Q96D05 121 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 RNF183Q96D59 192 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 ADTRPQ96IZ2 230 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 ANAPC13Q9BS18 74 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 MS4A5Q9H3V2 200 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 MBNL3Q9NUK0 354 aaKnown RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 LSM4Q9Y4Z0 139 aaKnown RBP3.51□□□□□ -1.85
VPS50-210ENST00000471188 WDR87Q6ZQQ6 2873 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 HTTP42858 3142 aa3.51□□□□□ -1.85
VPS50-210ENST00000471188 IGHV3-20A0A0C4DH32 117 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 TEX50A0A1B0GTY4 177 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 A0A1W2PQD3 144 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 LRRC30A6NM36 301 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 FAM90A26D6RGX4 464 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 P04436 131 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 LIPFP07098 398 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 OR5AL1P0C617 328 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 SMIM13P0DJ93 91 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 CTGFP29279 349 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 ARL3P36405 182 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 TAS2R45P59539 299 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 IGLV3-21P80748 117 aaPredicted RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 HHEXQ03014 270 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 C1orf61Q13536 156 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 WIPI1Q5MNZ9 446 aaPredicted RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 TIMM23BQ5SRD1 257 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 C9orf135Q5VTT2 229 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 PCSK4Q6UW60 755 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 C1orf122Q6ZSJ8 110 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 MOB1BQ7L9L4 216 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 MKXQ8IYA7 352 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 BOD1L2Q8IYS8 172 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 OR8A1Q8NGG7 326 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 SLC37A2Q8TED4 501 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 ST8SIA1Q92185 356 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 RAB1CQ92928 201 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 SPACA9Q96E40 222 aaPredicted RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 C1QTNF5Q9BXJ0 243 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 SH2D2AQ9NP31 389 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 DUSP13Q9UII6 198 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 BOKQ9UMX3 212 aaPredicted RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 PSG8Q9UQ74 426 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 COL6A3P12111 3177 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 NOTCH4Q99466 2003 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 NPIPB13A6NJU9 1138 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 HIGD1CA8MV81 97 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 NPIPB4C9JG80 1138 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 KLRC4-KLRK1H3BQV0 150 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 ZIC3O60481 467 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 SCGB2A1O75556 95 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 AGFG2O95081 481 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 RSPO1Q2MKA7 263 aaPredicted RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 ANXA2RQ3ZCQ2 193 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 HES3Q5TGS1 186 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 ANKRD37Q7Z713 158 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 NUP35Q8NFH5 326 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 ZNF488Q96MN9 340 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 OXGR1Q96P68 337 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 WDR83OSQ9Y284 106 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 TANC2Q9HCD6 1990 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 MYO15AQ9UKN7 3530 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 TRBV7-9A0A0J9YWB2 115 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 H3BMG7 143 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 TNFSF11O14788 317 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 DHHO43323 396 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 IGLV3-1P01715 115 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 MYF5P13349 255 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 ZNF718Q3SXZ3 478 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 GDF5OSQ5U4N7 250 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 LINC00696Q6ZRV3 163 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 DRAM1Q8N682 238 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 OR4A16Q8NH70 328 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 LRRC29Q8WV35 223 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 CACNG8Q8WXS5 425 aa3.5□□□□□ -1.85
VPS50-210ENST00000471188 H1FXQ92522 213 aaKnown RBP3.5□□□□□ -1.85
VPS50-210ENST00000471188 SGK494Q96LW2 274 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms