RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 PKD1P98161 4303 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 HSPG2P98160 4391 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 IGHV3-35A0A0C4DH35 117 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 A0A1W2PS18 150 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 F8W735 103 aaPredicted RBP4.89□□□□□ -1.63
SF3A3-205ENST00000470585 K7EIM0 57 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 RAB27BO00194 218 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 UPK2O00526 184 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 GIG44P09565 113 aaPredicted RBP4.89□□□□□ -1.63
SF3A3-205ENST00000470585 TRAPPC2P0DI81 140 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 TRAPPC2BP0DI82 140 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 BTF3P20290 206 aaKnown RBP4.89□□□□□ -1.63
SF3A3-205ENST00000470585 FGF9P31371 208 aaPredicted RBP4.89□□□□□ -1.63
SF3A3-205ENST00000470585 BRWD1-AS2P59051 145 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 C12orf74Q32Q52 190 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 C2orf76Q3KRA6 126 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 C19orf35Q6ZS72 473 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 PACRGLQ8N7B6 248 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 CSNK1G2-AS1Q8NCQ2 148 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 OR1P1Q8NH06 330 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 SCARB1Q8WTV0 552 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 CHRDL1Q9BU40 450 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 NXF2Q9GZY0 626 aaKnown RBP4.89□□□□□ -1.63
SF3A3-205ENST00000470585 KCNK15Q9H427 330 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 HRASLSQ9HDD0 168 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 FKBP14Q9NWM8 211 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 FKBP11Q9NYL4 201 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 SELENOKQ9Y6D0 94 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 V9GY05 133 aa4.89□□□□□ -1.63
SF3A3-205ENST00000470585 TMEM272A0A1B0GTI8 110 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 DNASE2O00115 360 aaPredicted RBP4.88□□□□□ -1.63
SF3A3-205ENST00000470585 DEFB4AO15263 64 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 PAX4O43316 350 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 REG1AP05451 166 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 SPART-AS1P0CW21 52 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 OR13C7P0DN81 318 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 RPA2P15927 270 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 GNB3P16520 340 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 HOXA1P49639 335 aaPredicted RBP4.88□□□□□ -1.63
SF3A3-205ENST00000470585 EIF2B2P49770 351 aaKnown RBP4.88□□□□□ -1.63
SF3A3-205ENST00000470585 MFAP4P55083 255 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 DEFB131AP59861 70 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 ERVK-16P61578 105 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 RCN1Q15293 331 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 SPHARQ15513 63 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 HACD4Q5VWC8 232 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 SLC25A24Q6NUK1 477 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 TCF24Q7RTU0 167 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 PQLC1Q8N2U9 271 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 C15orf53Q8NAA6 179 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 ZNF114Q8NC26 417 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 UFD1Q92890 307 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 TMEM56Q96MV1 263 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 GFI1Q99684 422 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 CCDC90BQ9GZT6 254 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 MS4A6AQ9H2W1 248 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 ACOT13Q9NPJ3 140 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 NDUFA4L2Q9NRX3 87 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
SF3A3-205ENST00000470585 NACAE9PAV3 2078 aa4.88□□□□□ -1.63
SF3A3-205ENST00000470585 TRAV1-2A0A0B4J238 106 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 IGKV1D-13A0A0B4J2D9 117 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 M0R2N4 97 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 PDCD5O14737 125 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 ST8SIA3O43173 380 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 SCGB2A1O75556 95 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 IGKV1-13P0DP09 117 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 GNRHRP30968 328 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 ALDH3B2P48448 385 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 WT1-ASQ06250 92 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 PLA2G7Q13093 441 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 INSL4Q14641 139 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 ZNF124Q15973 351 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 Q56UQ5 140 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 OR2B11Q5JQS5 317 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 C8orf59Q8N0T1 100 aaPredicted RBP4.87□□□□□ -1.63
SF3A3-205ENST00000470585 SPAG16Q8N0X2 631 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 NARS2Q96I59 477 aaKnown RBP4.87□□□□□ -1.63
SF3A3-205ENST00000470585 TSC22D3Q99576 134 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 SCRT2Q9NQ03 307 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 FAM212BQ9NTI7 297 aaPredicted RBP4.87□□□□□ -1.63
SF3A3-205ENST00000470585 TMEM140Q9NV12 185 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 PRNDQ9UKY0 176 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 SPATA2Q9UM82 520 aa4.87□□□□□ -1.63
SF3A3-205ENST00000470585 LSM2Q9Y333 95 aaKnown RBP4.87□□□□□ -1.63
SF3A3-205ENST00000470585 DYNC1H1Q14204 4646 aaKnown RBP4.86□□□□□ -1.63
SF3A3-205ENST00000470585 IFITM5A6NNB3 132 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 MARCH11A6NNE9 402 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 K7EQG2 157 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 YIF1AO95070 293 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 NFYAP23511 347 aaPredicted RBP4.86□□□□□ -1.63
SF3A3-205ENST00000470585 NPBWR1P48145 328 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 TFPI2P48307 235 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 AP2S1P53680 142 aaPredicted RBP4.86□□□□□ -1.63
SF3A3-205ENST00000470585 ZNF705AQ6ZN79 300 aaPredicted RBP4.86□□□□□ -1.63
SF3A3-205ENST00000470585 TMEM91Q6ZNR0 172 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 AHSA2Q719I0 299 aa4.86□□□□□ -1.63
SF3A3-205ENST00000470585 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms