RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PPP1R1CQ8WVI7 109 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 RAB40CQ96S21 281 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 ZC4H2Q9NQZ6 224 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 NDUFA4L2Q9NRX3 87 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 LINC00527Q9UJ94 153 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 RCL1Q9Y2P8 373 aaKnown RBP6.41□□□□□ -1.38
HDAC6-216ENST00000468949 WSB1Q9Y6I7 421 aa6.41□□□□□ -1.38
HDAC6-216ENST00000468949 STAB1Q9NY15 2570 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 A0A1B0GUS0 222 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 NPIPB5A8MRT5 1133 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 TEX22C9J3V5 150 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 K7EPK0 472 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 PITX3O75364 302 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 TSPAN9O75954 239 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 MBPP02686 304 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-216ENST00000468949 IGF1P05019 195 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 AREGP15514 252 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 CXCL3P19876 107 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 NPY1RP25929 384 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 PSMB6P28072 239 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 HTR2BP41595 481 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 FOXL1Q12952 345 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 RAB32Q13637 225 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 AARDQ4LEZ3 155 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 AKIRIN2Q53H80 203 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 SPANXN5Q5MJ07 72 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 STX12Q86Y82 276 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 Q8N2B8 174 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 OR5T1Q8NG75 326 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 OR10W1Q8NGF6 305 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 OR2T35Q8NGX2 323 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 FAM110DQ8TAY7 271 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-216ENST00000468949 NOL4LQ96MY1 436 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-216ENST00000468949 PSENENQ9NZ42 101 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 THYN1Q9P016 225 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 STRAPQ9Y3F4 350 aaKnown RBP6.4□□□□□ -1.38
HDAC6-216ENST00000468949 U3KQ87 197 aa6.4□□□□□ -1.38
HDAC6-216ENST00000468949 CUBNO60494 3623 aa6.4□□□□□ -1.39
HDAC6-216ENST00000468949 SVEP1Q4LDE5 3571 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 FXYD6-FXYD2A0A087WZ82 144 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 RPS10-NUDT3A0A1W2PQS6 291 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 IGLC7A0M8Q6 106 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 CLPSL1A2RUU4 121 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 E5RGE8 158 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 G3V318 75 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 H3BP45 60 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 H3BUA1 57 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 CORTO00230 105 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 PFDN1O60925 122 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 SCGB2A1O75556 95 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 DEDDO75618 318 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 SCAF4O95104 1147 aaKnown RBP6.39□□□□□ -1.39
HDAC6-216ENST00000468949 IFNA4P05014 189 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 HKR1P10072 659 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 PF4V1P10720 104 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 HIST1H1BP16401 226 aaKnown RBP6.39□□□□□ -1.39
HDAC6-216ENST00000468949 CRIP2P52943 208 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-216ENST00000468949 TPPP2P59282 170 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 ID3Q02535 119 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 MRGPRG-AS1Q2M3A8 158 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 PDLIM3Q53GG5 364 aaPredicted RBP6.39□□□□□ -1.39
HDAC6-216ENST00000468949 SLC25A24Q6NUK1 477 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 TEX38Q6PEX7 206 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 Q6ZS46 218 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 OR2C3Q8N628 320 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 COMMD1Q8N668 190 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 KLHDC1Q8N7A1 406 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 DCUN1D4Q92564 292 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 MISP3Q96FF7 219 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 C16orf95Q9H693 158 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 ZNF580Q9UK33 172 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 FBXO7Q9Y3I1 522 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 RNF114Q9Y508 228 aa6.39□□□□□ -1.39
HDAC6-216ENST00000468949 ELOA3CA0A087WX78 387 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 LINC01548A6NM66 108 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 E7EUB6 86 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 INS-IGF2F8WCM5 200 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 TSC22D2O75157 780 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 FBXO24O75426 580 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 MPC2O95563 127 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 TRGV3P03979 118 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 MDKP21741 143 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 OPRK1P41145 380 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 ATP5IP56385 69 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 TAS2R30P59541 319 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 HBG1P69891 147 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 HBG2P69892 147 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 SSBP2P81877 361 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 WT1-ASQ06250 92 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 EXOSC2Q13868 293 aaKnown RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 C12orf54Q6X4T0 127 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 ZNF329Q86UD4 541 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 LILRB2Q8N423 598 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 TTC9CQ8N5M4 171 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 INO80EQ8NBZ0 244 aaPredicted RBP6.38□□□□□ -1.39
HDAC6-216ENST00000468949 ZNF114Q8NC26 417 aa6.38□□□□□ -1.39
HDAC6-216ENST00000468949 OR1P1Q8NH06 330 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms