RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ISG15P05161 165 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 OR12D1P0DN82 309 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 CTSEP14091 401 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 HSD11B1P28845 292 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 CAPZBP47756 277 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 RANP62826 216 aaKnown RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 BASP1P80723 227 aaKnown RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 GTF2BQ00403 316 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 TNFRSF9Q07011 255 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 SMAGPQ0VAQ4 97 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 OGFRL1Q5TC84 451 aaPredicted RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 EBLN2Q6P2I7 272 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 TTC33Q6PID6 262 aaPredicted RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 SMARCD3Q6STE5 483 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 YIPF7Q8N8F6 280 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 PIGXQ8TBF5 258 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 RAB8BQ92930 207 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 GALMQ96C23 342 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 PACRGQ96M98 296 aaPredicted RBP2.33□□□□□ -2.04
LSM5-209ENST00000468872 OR8B2Q96RD0 313 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 DHRS9Q9BPW9 319 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 FAM206AQ9NX38 181 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 SLC22A13Q9Y226 551 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 ALG5Q9Y673 324 aa2.33□□□□□ -2.04
LSM5-209ENST00000468872 SMIM23A6NLE4 172 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 M0R036 132 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 APOEP02649 317 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 CALB1P05937 261 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 GABRA3P34903 492 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 SULT1A2P50226 295 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 CEBPGP53567 150 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 CCL7P80098 99 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 TSPAN31Q12999 210 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 OR8G1Q15617 311 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 UAP1Q16222 522 aaPredicted RBP2.32□□□□□ -2.04
LSM5-209ENST00000468872 CLEC12BQ2HXU8 276 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 SPATA31B1PQ5VZV4 182 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 NOXRED1Q6NXP6 359 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 Q6ZS52 159 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 OR10D4PQ8NGN7 298 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 LMX1AQ8TE12 382 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 TAMM41Q96BW9 452 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 TLCD1Q96CP7 247 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 CCDC42Q96M95 316 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 STACQ99469 402 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 XPNPEP1Q9NQW7 623 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 ZNF337Q9Y3M9 751 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 CNTRLQ7Z7A1 2325 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 NUP98P52948 1817 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 ZNF236Q9UL36 1845 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
LSM5-209ENST00000468872 SDHAF1A6NFY7 115 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 B4DEV8 164 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 GOLGA6L19H0YKK7 550 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 ACOX3O15254 700 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 SULT1B1O43704 296 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 SLC25A20O43772 301 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 SSNA1O43805 119 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 CTSGP08311 255 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 HIST1H1EP10412 219 aaKnown RBP2.31□□□□□ -2.04
LSM5-209ENST00000468872 GADD45AP24522 165 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 PSMA1P25786 263 aaKnown RBP2.31□□□□□ -2.04
LSM5-209ENST00000468872 ADORA1P30542 326 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 CD79BP40259 229 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 AP2S1P53680 142 aaPredicted RBP2.31□□□□□ -2.04
LSM5-209ENST00000468872 GABARAPL2P60520 117 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 CXCR4P61073 352 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 B2MP61769 119 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 REEP5Q00765 189 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 AESQ08117 197 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 PDGFRLQ15198 375 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 CLVS2Q5SYC1 327 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 DOLPP1Q86YN1 238 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 ZBTB8OSQ8IWT0 167 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 MSRB3Q8IXL7 192 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 TESCQ96BS2 214 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 SMIM12Q96EX1 92 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 TMEM216Q9P0N5 145 aa2.31□□□□□ -2.04
LSM5-209ENST00000468872 YLPM1P49750 1951 aaKnown RBP2.3□□□□□ -2.04
LSM5-209ENST00000468872 K7EQS6 105 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 CXCL2P19875 107 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 CXCL3P19876 107 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 CRABP1P29762 137 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 RPL12P30050 165 aaKnown RBP2.3□□□□□ -2.04
LSM5-209ENST00000468872 MIPP30301 263 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 BSPH1Q075Z2 132 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 PPP1R1AQ13522 171 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 PDK2Q15119 407 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 CST6Q15828 149 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 TMEM176BQ3YBM2 270 aaPredicted RBP2.3□□□□□ -2.04
LSM5-209ENST00000468872 FKBP1CQ5VVH2 108 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 LPCAT4Q643R3 524 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 OR5K1Q8NHB7 308 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 CD200R1Q8TD46 325 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 MRPS26Q9BYN8 205 aaKnown RBP2.3□□□□□ -2.04
LSM5-209ENST00000468872 GTSF1LQ9H1H1 148 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.3□□□□□ -2.04
LSM5-209ENST00000468872 SNX10Q9Y5X0 201 aa2.3□□□□□ -2.04
LSM5-209ENST00000468872 ZFC3H1O60293 1989 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms