RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 NCBP2LA6PVI3 153 aaKnown RBP16.41■□□□□ 0.22
TMEM53-207ENST00000468117 SCAF4O95104 1147 aaKnown RBP16.41■□□□□ 0.22
TMEM53-207ENST00000468117 FAM106CPP0CH98 169 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 APELAP0DMC3 54 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 RNASE2P10153 161 aaKnown RBP16.41■□□□□ 0.22
TMEM53-207ENST00000468117 BRS3P32247 399 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 LRRC20Q8TCA0 184 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 CITED4Q96RK1 184 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 INS-IGF2F8WCM5 200 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 OR13C7P0DN81 318 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 VWC2Q2TAL6 325 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 TMEM249Q2WGJ8 235 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 COMMD7Q86VX2 200 aa16.41■□□□□ 0.22
TMEM53-207ENST00000468117 TAF15Q92804 592 aaKnown RBP eCLIP16.41■□□□□ 0.22
TMEM53-207ENST00000468117 A0A0U1RQK1 487 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 IGLC7A0M8Q6 106 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 REG1AP05451 166 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 IGHV4-31P0DP07 118 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 FHITP49789 147 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 C5orf64Q2M2E5 130 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 C2orf83Q53S99 150 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 KLF17Q5JT82 389 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-207ENST00000468117 SOX21Q9Y651 276 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-207ENST00000468117 SRSF12Q8WXF0 261 aaKnown RBP16.4■□□□□ 0.22
TMEM53-207ENST00000468117 PARD6GQ9BYG4 376 aaPredicted RBP16.4■□□□□ 0.22
TMEM53-207ENST00000468117 FBXO7Q9Y3I1 522 aa16.4■□□□□ 0.22
TMEM53-207ENST00000468117 SMCO3A2RU48 225 aa16.39■□□□□ 0.21
TMEM53-207ENST00000468117 CNIH1O95406 144 aa16.39■□□□□ 0.21
TMEM53-207ENST00000468117 FLNAP21333 2647 aaKnown RBP16.39■□□□□ 0.21
TMEM53-207ENST00000468117 PRH1P02810 166 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 AREGP15514 252 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 FGF7P21781 194 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 WFDC11Q8NEX6 87 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 ATP5IP56385 69 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-207ENST00000468117 DLK1P80370 383 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 ARSJQ5FYB0 599 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-207ENST00000468117 PXDC1Q5TGL8 231 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 Q6ZRG5 221 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 SAT2Q96F10 170 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-207ENST00000468117 P2RX4Q99571 388 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 GGACTQ9BVM4 153 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 PFDN2Q9UHV9 154 aa16.38■□□□□ 0.21
TMEM53-207ENST00000468117 TEX22C9J3V5 150 aa16.37■□□□□ 0.21
TMEM53-207ENST00000468117 MDKP21741 143 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-207ENST00000468117 TREML4Q6UXN2 200 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 SSMEM1Q8WWF3 244 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 PSMG3Q9BT73 122 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-207ENST00000468117 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 FAM96BQ9Y3D0 163 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 TLN2Q9Y4G6 2542 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 CAMLGP49069 296 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 RAB5CP51148 216 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 BTNL8Q6UX41 500 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 C19orf35Q6ZS72 473 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 NPCDR1Q9BY65 106 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 WDR83OSQ9Y284 106 aa16.36■□□□□ 0.21
TMEM53-207ENST00000468117 UMAD1C9J7I0 102 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 J3QLI3 93 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 ZNF616Q08AN1 781 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 FXYD3Q14802 87 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 MLANAQ16655 118 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 MRPL41Q8IXM3 137 aaKnown RBP16.35■□□□□ 0.21
TMEM53-207ENST00000468117 Q8N9W7 124 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 FAM213BQ8TBF2 198 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 FAM103A1Q9BTL3 118 aaKnown RBP16.35■□□□□ 0.21
TMEM53-207ENST00000468117 MEGF9Q9H1U4 602 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 HRH4Q9H3N8 390 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 MXRA5Q9NR99 2828 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 SUB1P53999 127 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMEM53-207ENST00000468117 BLOC1S1P78537 153 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 AKR1C8PQ5T2L2 129 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 PARP11Q9NR21 331 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 C1RLQ9NZP8 487 aa16.35■□□□□ 0.21
TMEM53-207ENST00000468117 TRIM77I1YAP6 450 aa16.34■□□□□ 0.21
TMEM53-207ENST00000468117 PIFOQ8TCI5 191 aa16.34■□□□□ 0.21
TMEM53-207ENST00000468117 VSIRQ9H7M9 311 aa16.34■□□□□ 0.21
TMEM53-207ENST00000468117 NPVFQ9HCQ7 196 aa16.34■□□□□ 0.21
TMEM53-207ENST00000468117 AKAP9Q99996 3911 aa16.34■□□□□ 0.21
TMEM53-207ENST00000468117 ELLP55199 621 aaPredicted RBP16.33■□□□□ 0.21
TMEM53-207ENST00000468117 CX3CL1P78423 397 aa16.33■□□□□ 0.21
TMEM53-207ENST00000468117 ZNF562Q6V9R5 426 aa16.33■□□□□ 0.21
TMEM53-207ENST00000468117 CENPVQ7Z7K6 275 aaPredicted RBP16.33■□□□□ 0.21
TMEM53-207ENST00000468117 CIARTQ8N365 385 aaPredicted RBP16.33■□□□□ 0.21
TMEM53-207ENST00000468117 ABHD5Q8WTS1 349 aa16.33■□□□□ 0.21
TMEM53-207ENST00000468117 SSX3Q99909 188 aa16.33■□□□□ 0.21
TMEM53-207ENST00000468117 TIMM9Q9Y5J7 89 aa16.33■□□□□ 0.21
TMEM53-207ENST00000468117 MFSD2BA6NFX1 497 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 MFAP2P55001 183 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 SERF2P84101 59 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 AKR1C1Q04828 323 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 CD69Q07108 199 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 TMEM219Q86XT9 240 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 ZNF114Q8NC26 417 aa16.33■□□□□ 0.2
TMEM53-207ENST00000468117 FBP1P09467 338 aa16.32■□□□□ 0.2
TMEM53-207ENST00000468117 NDPQ00604 133 aa16.32■□□□□ 0.2
TMEM53-207ENST00000468117 ZNF709Q8N972 641 aa16.32■□□□□ 0.2
TMEM53-207ENST00000468117 OPRK1P41145 380 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 GAMTQ14353 236 aa16.31■□□□□ 0.2
TMEM53-207ENST00000468117 HSD17B13Q7Z5P4 300 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms