RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 MAS1LP35410 378 aa15□□□□□ -0.01
CHRNA4-203ENST00000467563 RPL27AP46776 148 aaKnown RBP15□□□□□ -0.01
CHRNA4-203ENST00000467563 ATP5IP56385 69 aaPredicted RBP15□□□□□ -0.01
CHRNA4-203ENST00000467563 GNB1P62873 340 aa15□□□□□ -0.01
CHRNA4-203ENST00000467563 HIST2H2BCQ6DN03 193 aa15□□□□□ -0.01
CHRNA4-203ENST00000467563 NPBQ8NG41 125 aa15□□□□□ -0.01
CHRNA4-203ENST00000467563 OR2T10Q8NGZ9 312 aa15□□□□□ -0.01
CHRNA4-203ENST00000467563 C1orf159Q96HA4 380 aa15□□□□□ -0.01
CHRNA4-203ENST00000467563 IGLC7A0M8Q6 106 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 NUDT19A8MXV4 375 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 NDUFA3O95167 84 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 TSPAN15O95858 294 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 ELLP55199 621 aaPredicted RBP14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 PLGLAQ15195 96 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 LINC00052Q96N35 136 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 FAM210AQ96ND0 272 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 CELSR1Q9NYQ6 3014 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 IGHV3OR16-10A0A075B7F0 116 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 AKR1C1Q04828 323 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 EBI3Q14213 229 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 DEFB113Q30KQ7 82 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 ACSM6Q6P461 480 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 Q8N6K4 173 aa14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 BEX4Q9NWD9 120 aaPredicted RBP14.99□□□□□ -0.01
CHRNA4-203ENST00000467563 A0A1B0GV50 99 aa14.98□□□□□ -0.01
CHRNA4-203ENST00000467563 B4DSR2 109 aa14.98□□□□□ -0.01
CHRNA4-203ENST00000467563 REG1AP05451 166 aa14.98□□□□□ -0.01
CHRNA4-203ENST00000467563 DPPA3Q6W0C5 159 aa14.98□□□□□ -0.01
CHRNA4-203ENST00000467563 P2RX4Q99571 388 aa14.98□□□□□ -0.01
CHRNA4-203ENST00000467563 APELAP0DMC3 54 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 AREGP15514 252 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 FAM120AOSQ5T036 256 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 RUSC1-AS1Q66K80 236 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 SPSB3Q6PJ21 355 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 BPIFCQ8NFQ6 507 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 NPVFQ9HCQ7 196 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 KIAA1456Q9P272 454 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 LSM4Q9Y4Z0 139 aaKnown RBP14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 CSMD1Q96PZ7 3565 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 TEX22C9J3V5 150 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 H2AFB1P0C5Y9 115 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 ZNF726P1Q15940 193 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 MLANAQ16655 118 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 UQCC3Q6UW78 93 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 ZNF709Q8N972 641 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 SRSF12Q8WXF0 261 aaKnown RBP14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 MGST2Q99735 147 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 TMEM231Q9H6L2 316 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 HIF1ANQ9NWT6 349 aa14.97□□□□□ -0.01
CHRNA4-203ENST00000467563 TRAV40A0A0B4J280 105 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 IGHV1-69DA0A0B4J2H0 117 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 IGHV1-69P01742 117 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 RAB2AP61019 212 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 CCL20P78556 96 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 C5orf64Q2M2E5 130 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 TMEM41BQ5BJD5 291 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 C7orf69Q9H7B7 122 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 FAM96BQ9Y3D0 163 aa14.96□□□□□ -0.01
CHRNA4-203ENST00000467563 MPDU1O75352 247 aa14.96□□□□□ -0.02
CHRNA4-203ENST00000467563 ZP3P21754 424 aa14.96□□□□□ -0.02
CHRNA4-203ENST00000467563 FFAR4Q5NUL3 377 aa14.96□□□□□ -0.02
CHRNA4-203ENST00000467563 C19orf35Q6ZS72 473 aa14.96□□□□□ -0.02
CHRNA4-203ENST00000467563 SSX7Q7RTT5 188 aa14.96□□□□□ -0.02
CHRNA4-203ENST00000467563 SFT2D1Q8WV19 159 aa14.96□□□□□ -0.02
CHRNA4-203ENST00000467563 FNDC10F2Z333 226 aa14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 C17orf112F2Z3M2 114 aa14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 TMEM11P17152 192 aa14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 BRD3OSQ6XYD6 125 aa14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 LRRC75A-AS1Q8N1F1 130 aa14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 RPP25LQ8N5L8 163 aaKnown RBP14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 MAPK1IP1LQ8NDC0 245 aa14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 RCC1LQ96I51 464 aaKnown RBP14.95□□□□□ -0.02
CHRNA4-203ENST00000467563 KRBOX1C9JBD0 128 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 IGHV4-38-2P0DP08 117 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 CD69Q07108 199 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 GAMTQ14353 236 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 SCRT1Q9BWW7 348 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 GGTLC1Q9BX51 225 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 NCBP2LA6PVI3 153 aaKnown RBP14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 CNIH1O95406 144 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 FAM106CPP0CH98 169 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 SUB1P53999 127 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 MFAP2P55001 183 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 TEPPQ6URK8 271 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 COMMD1Q8N668 190 aa14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 NARS2Q96I59 477 aaKnown RBP14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 FNDC4Q9H6D8 234 aaPredicted RBP14.94□□□□□ -0.02
CHRNA4-203ENST00000467563 EIF3GO75821 320 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 BRS3P32247 399 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 Q5PR19 223 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 MRPL41Q8IXM3 137 aaKnown RBP14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 ZNF114Q8NC26 417 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 RNASEH2CQ8TDP1 164 aaKnown RBP14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 SSMEM1Q8WWF3 244 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 IGKV1OR2-108A0A075B7D4 117 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 TRAV20A0A0B4J274 112 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 RNF223E7ERA6 249 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 AVPP01185 164 aa14.93□□□□□ -0.02
CHRNA4-203ENST00000467563 CD5P06127 495 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms