RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-231ENST00000467435 ZNF709Q8N972 641 aa9.82□□□□□ -0.84
HDLBP-231ENST00000467435 LINC01356Q8N9X3 169 aa9.82□□□□□ -0.84
HDLBP-231ENST00000467435 LYPD6BQ8NI32 183 aa9.82□□□□□ -0.84
HDLBP-231ENST00000467435 SRSF12Q8WXF0 261 aaKnown RBP9.82□□□□□ -0.84
HDLBP-231ENST00000467435 VSIRQ9H7M9 311 aa9.82□□□□□ -0.84
HDLBP-231ENST00000467435 HIF1ANQ9NWT6 349 aa9.82□□□□□ -0.84
HDLBP-231ENST00000467435 FAM208BQ5VWN6 2430 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 FNDC10F2Z333 226 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 FCN1O00602 326 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 REG1AP05451 166 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 FAM106CPP0CH98 169 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 AREGP15514 252 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 ZP3P21754 424 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 CD69Q07108 199 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 C5orf64Q2M2E5 130 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 FFAR4Q5NUL3 377 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 HIST2H2BCQ6DN03 193 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 ACSM6Q6P461 480 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 SLC16A13Q7RTY0 426 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 ZNF114Q8NC26 417 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 FAM210AQ96ND0 272 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 P2RX4Q99571 388 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 C7orf69Q9H7B7 122 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 COL12A1Q99715 3063 aa9.81□□□□□ -0.84
HDLBP-231ENST00000467435 A0A1B0GV50 99 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 TEX22C9J3V5 150 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 RNF223E7ERA6 249 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 AGPAT2O15120 278 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 CNIH1O95406 144 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 APELAP0DMC3 54 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 IGHV4-38-2P0DP08 117 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 GATA3P23771 443 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 RAB2AP61019 212 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 LOXL1Q08397 574 aaPredicted RBP9.8□□□□□ -0.84
HDLBP-231ENST00000467435 FAM120AOSQ5T036 256 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 BRD3OSQ6XYD6 125 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 COMMD1Q8N668 190 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 LFNGQ8NES3 379 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 RNASEH2CQ8TDP1 164 aaKnown RBP9.8□□□□□ -0.84
HDLBP-231ENST00000467435 ABHD5Q8WTS1 349 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 MBD6Q96DN6 1003 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 LINC00052Q96N35 136 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 MGST2Q99735 147 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 GGTLC1Q9BX51 225 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 NPVFQ9HCQ7 196 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 KCNIP2Q9NS61 270 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 RPRMQ9NS64 109 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 LSM4Q9Y4Z0 139 aaKnown RBP9.8□□□□□ -0.84
HDLBP-231ENST00000467435 WNK2Q9Y3S1 2297 aa9.8□□□□□ -0.84
HDLBP-231ENST00000467435 CHD6Q8TD26 2715 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 NCBP2LA6PVI3 153 aaKnown RBP9.79□□□□□ -0.84
HDLBP-231ENST00000467435 SOX15O60248 233 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 HBE1P02100 147 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 MBP02144 154 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 OPRK1P41145 380 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 SPSB3Q6PJ21 355 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 TEPPQ6URK8 271 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 SSMEM1Q8WWF3 244 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 RCC1LQ96I51 464 aaKnown RBP9.79□□□□□ -0.84
HDLBP-231ENST00000467435 NARS2Q96I59 477 aaKnown RBP9.79□□□□□ -0.84
HDLBP-231ENST00000467435 SLC35E1Q96K37 410 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 SRSF8Q9BRL6 282 aaKnown RBP9.79□□□□□ -0.84
HDLBP-231ENST00000467435 TMEM231Q9H6L2 316 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 C1RLQ9NZP8 487 aa9.79□□□□□ -0.84
HDLBP-231ENST00000467435 A0A0U1RQK1 487 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 BTBD17A6NE02 478 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 KRBOX1C9JBD0 128 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 GPX4P36969 197 aaPredicted RBP9.78□□□□□ -0.84
HDLBP-231ENST00000467435 FXYD3Q14802 87 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 ACOT6Q3I5F7 207 aaPredicted RBP9.78□□□□□ -0.84
HDLBP-231ENST00000467435 SSX7Q7RTT5 188 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 TMEM144Q7Z5S9 345 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 MAPK1IP1LQ8NDC0 245 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 BPIFCQ8NFQ6 507 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 SFT2D1Q8WV19 159 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 CACNG8Q8WXS5 425 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 ARPC1AQ92747 370 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 Q96MF0 132 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 TREM1Q9NP99 234 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 FAM96BQ9Y3D0 163 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 F11RQ9Y624 299 aaKnown RBP9.78□□□□□ -0.84
HDLBP-231ENST00000467435 PXMP4Q9Y6I8 212 aa9.78□□□□□ -0.84
HDLBP-231ENST00000467435 SPTAN1Q13813 2472 aaKnown RBP9.77□□□□□ -0.85
HDLBP-231ENST00000467435 MAP1LC3B2A6NCE7 125 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 J3QLI3 93 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 CORTO00230 105 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 M6PRP20645 277 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 MFAP2P55001 183 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
HDLBP-231ENST00000467435 RAB31Q13636 194 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 GAMTQ14353 236 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 GUK1Q16774 197 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 MIC13Q5XKP0 118 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 FAM122CQ6P4D5 195 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 PRSS57Q6UWY2 283 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 C19orf35Q6ZS72 473 aa9.77□□□□□ -0.85
HDLBP-231ENST00000467435 KRTAP1-3Q8IUG1 177 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms